Table 5.
Genes for tolerance against heavy metal toxicity in P. agglomerans C1.
| Gene | EC No. | Annotation | Gene Location, Coding Strand (+/−) |
|---|---|---|---|
| Arsenic tolerance | |||
| arsRH | |||
| arsR | Arsenical resistance operon repressor | Contig2: 346889-347179, + | |
| arsH | Arsenic resistance protein ArsH | Contig2: 347176-347898, + | |
| arsRBC | |||
| arsR | Arsenical resistance operon repressor | Contig2: 350170-349817, − | |
| arsB | Arsenic efflux pump protein | Contig2: 349720-348437, − | |
| arsC | 1.20.4.1 | Arsenate reductase glutaredoxin-coupled, Glutaredoxin-like family |
Contig2: 348387-347959, − |
| arsR-acr3 | |||
| arsR | Arsenical resistance operon repressor | Contig9: 2594-2229, − | |
| acr3 | Arsenical-resistance protein ACR3 | Contig9: 2180-1200, − | |
| Copper tolerance | |||
| cueR-copA | |||
| cueR | Transcriptional regulator, MerR family | Contig1: 198563-198967, + | |
| copA | 3.6.3.3 7.2.2.12 7.2.2.9 |
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase |
Contig1: 195952-198465, − |
| cueR-copA | |||
| cueR | Transcriptional regulator, MerR family | Contig2: 350890-350432, − | |
| copA | 3.6.3.3 7.2.2.12 7.2.2.9 |
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase |
Contig2: 350970-353627, + |
| copABCD_pcoRS | |||
| copA | Multicopper oxidase | Contig2: 364520-366361, + | |
| copB | Copper resistance protein CopB | Contig2: 366396-367349, + | |
| copC | Copper resistance protein CopC | Contig2: 367381-367761, + | |
| copD | Copper resistance protein CopD | Contig2: 367766-368698, + | |
| pcoR | Transcriptional regulator PcoR | Contig2: 368730-369410, + | |
| pcoS | 2.7.13.3 | Sensory protein kinase PcoS | Contig2: 369407-370816, + |
| Cadmium tolerance | |||
| cusCFBA_cusSR | |||
| cusC | Cation efflux system protein CusC | Contig2: 360131-358746, − | |
| cusF | Cation efflux system protein CusF | Contig2: 358717-358364, − | |
| cusB | Cobalt/zinc/cadmium efflux RND transporter, Membrane fusion protein, CzcB family |
Contig2: 358250-356958, - | |
| cusA | Cation efflux system protein | Contig2: 356947-357380, − | |
| cusR | Copper-sensing two-component system response regulator CusR | Contig2: 360326-361009, + | |
| cusS | Copper sensory histidine kinase CusS | Contig2: 360999-362453, + | |
| czcAC | |||
| czcA | Cobalt-zinc-cadmium resistance protein CzcA | Contig2: 504650-501588, − | |
| czcC | Probable Co/Zn/Cd efflux system membrane fusion protein | Contig2: 505738-504650, − | |