Table 2.
Perturbation of matrikine-producing collagen genes.
| SSc-PF vs. NL | IPF vs. NL | ||||||
|---|---|---|---|---|---|---|---|
| Symbol | Entrez_ID | log2FC | q-value | Symbol | Entrez_ID | log2FC | q-value |
| COL9A2 | 1298 | 1.12 | 1.91E-05 | COL9A2 | 1298 | 1.10 | 2.60E-05 |
| COL7A1 | 1294 | 2.14 | 3.20E-05 | COL1A1* | 1277 | 2.29 | 4.71E-05 |
| COL15A1* | 1306 | 1.96 | 5.14E-05 | COL17A1* | 1308 | 1.94 | 1.31E-04 |
| COL17A1* | 1308 | 2.06 | 5.21E-05 | COL7A1 | 1294 | 1.92 | 1.56E-04 |
| COL1A1* | 1277 | 2.09 | 1.42E-04 | COL15A1* | 1306 | 1.59 | 6.54E-04 |
| COL10A1 | 1300 | 1.31 | 5.53E-04 | COL1A2* | 1278 | 1.69 | 1.71E-03 |
| COL1A2* | 1278 | 1.68 | 1.63E-03 | COL10A1 | 1300 | 1.18 | 1.79E-03 |
| COL3A1 | 1281 | 1.84 | 5.43E-03 | COL3A1 | 1281 | 1.83 | 6.12E-03 |
| COL5A2 | 1290 | 1.13 | 1.46E-02 | COL5A2 | 1290 | 1.08 | 1.96E-02 |
DE upregulated genes are highlighted in red (q ≤ 0.1, log2FC ≥ 1 representing a linear fold change of 2). Genes are sorted by q-value from smallest to largest. Bold*matrikine-producing collagen genes.