TABLE 1.
Genes involved in motility in Synechocystis.
| Gene ID | Gene name | Gene annotation | References |
| Signal transduction for pilus assembly and motility | |||
| sll0041 | pixJ1 | Methyl-accepting chemotaxis protein | Yoshihara et al., 2000 |
| sll0042 | pixJ2 | Methyl-accepting chemotaxis protein | Yoshihara et al., 2000 |
| slr1694 | pixD | Blue-light using flavin photoreceptor | Schuergers et al., 2015 |
| slr1212a,c | uirS/SynEtr1a,c | UV-A photosensor | Song et al., 2011 |
| sll0821 | cph2 | Phytochrome-like photoreceptor | Park et al., 2000 |
| slr1143 | cip1 | Cph2-interacting protein 1 | Angerer et al., 2017 |
| sll0886 | – | Sll0886 protein | Kirik and Babykin, 2008 |
| slr1693 | pixE | PatA subfamily protein | Okajima et al., 2005 |
| sll0038 | pixG | PatA subfamily protein | Yoshihara et al., 2000 |
| sll0039 | pixH | CheY subfamily protein | Yoshihara et al., 2000 |
| sll0040 | pixI | CheW-like protein | Yoshihara et al., 2000 |
| sll0043 | pixL | CheA-like protein | Yoshihara et al., 2000 |
| sll0058 | dnaK1 | Charperone | Bhaya et al., 2001 |
| slr1214 | lsiR | PatA-type regulator | Song et al., 2011 |
| slr1213 | uirR | Response regulator | Song et al., 2011 |
| sll1371 | sycrp1 | cAMP receptor | Yoshimura et al., 2000 |
| sll1924 | sycrp2 | cAMP receptor | Song et al., 2018 |
| slr0895 | prqR | DNA-binding transcriptional regulator | Kirik et al., 2008 |
| sll1626a | lexAa | Transcription regulator LexA | Kamei et al., 2001a |
| slr1564a | sigFa | RNA polymerase sigma-37 | Bhaya et al., 1999 |
| sll1575 | spkA | Ser/Thr protein kinase | Kamei et al., 2001b |
| slr1697 | spkB | Ser/Thr protein kinase | Kamei et al., 2002 |
| slr1443e | spkEe | Ser/Thr protein kinase-like protein E | Kim et al., 2004 |
| slr1991 | cya1 | Adenylate cyclase | Terauchi and Ohmori, 1999 |
| ssr3341b | hfqb | RNA chaperone | Dienst et al., 2008 |
| sll0183 | – | Sll0183 protein | Bhaya et al., 2001 |
| sll0301 | – | Sll0301 protein | Bhaya et al., 2001 |
| slr0358 | – | Slr0358 protein | Bhaya et al., 2001 |
| sll0414 | – | Sll0414 protein | Bhaya et al., 2001 |
| sll0415 | – | ABC-transporter | Bhaya et al., 2001 |
| sll0564 | – | Sll0564 protein | Bhaya et al., 2001 |
| sll0565 | – | Sll0565 protein | Bhaya et al., 2001 |
| sll0899e | – | Bifunctional protein GlmU | Kim et al., 2009 |
| sll0141e | – | Sll0141 protein | Gonçalves et al., 2018 |
| sll0180e | – | Sll0180 protein | Gonçalves et al., 2018 |
| slr0369e | – | Cation or drug efflux system protein | Gonçalves et al., 2018 |
| sll1384 | – | Sll1384 protein | Chen and Xu, 2009 |
| slr1964 | frp | Fluorescence recovery protein | Bhaya et al., 2001 |
| slr1204d,e sll1679d,e sll1427d,e | htrAd,e degQd,e degSd,e | Deg proteases | Barker et al., 2006 |
| – | PilRb | Antisense RNA of pilA11 | Hu et al., 2018 |
| slr2031 | – | Sigma factor SibG regulation protein RsbU | Kamei et al., 1998 |
| slr0388 | comF | Competence-related protein | Nakasugi et al., 2006 |
| Pilus biogenesis and assembly | |||
| sll1694 | pilA1 | Pilin | Yoshihara et al., 2001 |
| sll1695 | pilA2 | Pilin-like protein | Bhaya et al., 1999 |
| slr1456 | pilA4 | Pilin-like protein | Yoshihara et al., 2001 |
| slr1928 | pilA5 | Pilin-like protein | Yoshihara et al., 2001 |
| slr1929 | pilA6 | Pilin-like protein | Yoshihara et al., 2001 |
| slr1930 | pilA7 | Pilin-like protein | Yoshihara et al., 2001 |
| slr1931 | pilA8 | Pilin-like protein | Yoshihara et al., 2001 |
| slr2015 | pilA9 | Pilin-like protein | Yoshimura et al., 2002a |
| slr2016 | pilA10 | Pilin-like protein | Yoshimura et al., 2002a |
| slr2017 | pilA11 | Pilin-like protein | Yoshimura et al., 2002a |
| slr2018 | pilA12 | Pilin-like protein | Yoshimura et al., 2002a |
| slr0063 | pilB1 | Pilus assembly | Yoshihara et al., 2001 |
| slr0079 | GspE/PulE | Pilus assembly pathway ATPase | Yoshihara et al., 2001 |
| slr0162/slr0163 | pilC | Inner membrane protein | Bhaya et al., 2001 |
| slr1120e | pilDe | Prepilin peptidase/N-methylase | Bhaya et al., 2001 |
| slr1041 | pilG | PatA-like protein | Yoshihara et al., 2002 |
| slr1042 | pilH | CheY-like protein | Yoshihara et al., 2002 |
| slr1043 | pilI | CheW-like protein | Yoshihara et al., 2002 |
| slr1044a | pilJ/ctr1a | Methyl-accepting chemotaxis protein | Yoshihara et al., 2002 |
| slr0073 | pilL-N | CheA-like protein | Yoshihara et al., 2002 |
| slr0322 | pilL-C | CheA-like protein | Yoshihara et al., 2002 |
| slr1274 | pilM | Pilin pore complex | Yoshihara et al., 2001 |
| slr1275 | pilN | Pilin pore complex | Yoshihara et al., 2001 |
| slr1276 | pilO | Pilin pore complex | Yoshihara et al., 2001 |
| slr1277 | pilQ | Pilin secretin pore | Yoshihara et al., 2001 |
| slr0161a | pilT1a | Pilus assembly | Bhaya et al., 2001 |
| sll1533 | pilT2 | Twitching mobility protein | Bhaya et al., 2000 |
| sll1107 | – | TFP biogenesis protein PilI homolog | Singh et al., 2006 |
The superscript lowercase letters of a, b, c, d, and e represent genes involved in transcriptional, post-transcriptional, translational, protein stability, post-translational levels in the regulation of pilin, and/or pilin-like proteins, respectively.