FLCN regulates PODXL trafficking under 2D culture conditions.
A, parental cells that had been transfected with control siRNA (siControl), siRNAs against Rab35 (siRab35), or FLCN (two independent target sites: #1 and #2) (siFLCN) were plated on glass-bottom dishes and fixed at 3 h after plating, followed by counting of cells with co-localized PODXL and actin (30 cells/condition). The arrowheads show PODXL co-localizing with actin. Scale bars, 10 μm. The graph shows the means and S.E. (error bars) of four independent experiments. *, p < 0.05; **, p < 0.01 (Dunnett's test). B, KD efficiency of Rab35 and FLCN as revealed by immunoblotting (IB) with anti-FLCN, anti-Rab35, and anti-β-actin antibodies. The arrowhead indicates the position of endogenous FLCN. The asterisk indicates a nonspecific band of the primary antibody. C, parental cells and Myc-FLCN–expressing cells (+Myc-FLCN) that had been transfected with control siRNA or siRNA against FLCN (#1) were plated on glass-bottom dishes and fixed at 3 h after plating, followed by counting of cells with co-localized PODXL and actin (30 cells/condition). The graph shows the means and S.E. (error bars) of three independent experiments. *, p < 0.05; NS, not significant (Tukey's test). The arrowhead shows PODXL co-localizing with actin. D, lysates of the cells used in C were analyzed by immunoblotting with anti-FLCN and anti-β-actin antibodies. Note that endogenous (endo) FLCN, but not exogenous mouse FLCN, were efficiently knocked down by the siFLCN #1. Because knockdown of endogenous FLCN in Myc-FLCN–expressing cells was not observed, presumably because of the existence of the degradation product of Myc-FLCN, the decrease of endogenous FLCN mRNA in parental and Myc-FLCN–expressing MDCK II cells that had been transfected with siFLCN#1 was also confirmed by real-time PCR analysis (data not shown). The asterisks indicate nonspecific bands of the primary antibody.