Skip to main content
. 2020 Mar 18;19:61. doi: 10.1186/s12943-020-01181-x

Table 3.

List of non-codingRNAs, their targets and the type of interactions, cited by only one scientific article, and therefore excluded from the network illustrated in Fig. 1 and further described and discussed in the main text of the review

Non-coding RNA Target Type of interaction* PMID Reference
AC0269041 SNAI2 pos 29774079 [1]
AGAP2-AS1 MyD88 pos 30157918 [2]
Ai-EGOT ITPR1, HNRNPH1 pos 30999914 [3]
AK023948 AKT1 pos 28176758 [4]
ANCR EZH2 neg 27716745 [5]
ARNILA miR-204 neg 29844570 [6]
ASncmtRNA-1 CCNB1, CCND1, CDK1, CDK4, BIRC5 pos 31142736 [7]
BCYRN1 BCL2L1 pos 27277684 [8]
BORG RPAIN pos 30467380 [9]
CASIMO1 SQLE pos 29765154 [10]
CCAT1 miR-148a/152, miR-204, ANXA2, miR-211 neg 31695775 [11]
circ_0025202 miR-182-5p, FOXO3 neg 31153828 [12]
circAGFG miR-195-5p neg 30621700 [13]
circANKS1B miR-148a, miR-152 neg 30454010 [14]
circEPSTI1 miR-4753, miR-6809 neg 30083277 [15]
circFoxo3 FOXO3 pos 27886165 [16]
circGFRA1 miR-34a pos/neg 29037220 [17]
circIRAK3 miR-3607 neg 29803789 [18]
circKIF4A miR-375 neg 30744636 [19]
CYTOR mTOR, GOLPH3, KIF14, PRKCA, SMYD3 pos 27617288 [20]
DANCR RXRA, PIK3CA pos 30518934 [21]
DSCAM-AS1 HNRNPL pos 27666543 [22]
EFNA3 (NC1 and NC2) EFNA3 pos 25023702 [23]
ELAV1 CD133 neg 27197265 [24]
EPB41L4A-AS2 RARRES1 pos 30764831 [25]
EPIC1 CDC45, CDC20, CCNA2, CDKN1A pos 29622465 [26]
Esrp2-as ESRP2 pos 28759043 [27]
FGF13-AS1 MYCBP, IGF2BP neg 30771425 [28]
FN1 miR-200c neg 30967542 [29]
GAS5 miR-222 neg 29969658 [30]
IRAIN IGF1R neg 30195750 [31]
LncKLHDC7B KLHDC7B pos 30648789 [32]
let-7a BCL2L1 neg 26915294 [33]
LINC00673 miR-515-5p neg 31623640 [34]
LINC00968 WNT2 neg 30791958 [35]
LINC01125 LXR-623 pos 30867411 [36]
LINC01133 KLF4 pos 31283068 [37]
LINC01355 CCDN1, FOXO3 neg 31243265 [38]
LINC01638 MYCBP pos 30002443 [39]
LINC02582 USP7 neg 31601781 [40]
LINCIN NF90 (a major spliced form of interleukin enhancer binding factor 3, ILF3) CDKN1A pos, neg 28558830 [41]
LINCK RSL1D1, ZEB1, ZO-1, CDH1/E-cadherin, CDH2/N-cadherin, VIM pos, pos, neg, neg, pos, pos 30795783 [42]
LINCRNA-APOC1P1–3 TUBA1A pos 27228351 [43]
LINC-RoR DUSP7 neg 29041978 [44]
LINC-ZNF469–3 miR-574-5p pos 29755127 [45]
LINP1 IGFBP3 pos 30725116 [46]
LncATB miR-200, TWIST1 neg 30518916 [47]
Lnc-BM JAK2/STAT pos 29130936 [48]
lncRNA152, lncRNA67 E2F4 pos 26236012 [49]
lncRNA-Hh GAS1 pos 26418365 [50]
LOC284454 COL2A1, COL4A1 COL6A1, ITGA2 neg 29227193 [51]
MAYA MST1, YAP1 pos 28114269 [52]
MBNL1 DBNL, TACC neg 26883358 [53]
MEG3 TGFB, TGFBR1, SMAD2 neg 26205790 [54]
MIR100HG CDKN1B pos 30042378 [55]
miR-101 POMP neg 26145175 [56]
miR-103, miR-107 NKILA neg 25759022 [57]
miR-105 MXI1 neg 29588351 [58]
miR-106b BRMS1L neg 25406648 [59]
miR-1204 VDR neg 29555976 [60]
miR-122 PKM neg 25621950 [61]
miR-124 IL-11 neg 29343249 [62]
miR-1254 CCAR1 neg 27002217 [63]
miR-1285, miR-136 HERC4 neg 30710319 [64]
miR-130a PTEN neg 28935812 [65]
miR-132, miR-212 SOX4 neg 26377202 [66]
miR-135 RUNX2 neg 25634212 [67]
miR-135a1 ESR1, ESRRA, NCOA1 neg 29945962 [68]
miR-138 EZH2 neg 25339353 [69]
miR-139 MAT2A, POLQ, TOP1, TOP2A, XRCC5 neg 29180477 [70]
miR-141 TCF12 neg 26068592 [71]
miR-142 APC neg 25406066 [72]
miR-144 TET2, EIF5A2, ATXN2 neg 29109788 [73]
miR-148a DKK1 neg 29721077 [74]
miR-148b ITGA5, ALCAM neg 27328731 [75]
miR-15 BCL2 neg 26915294 [33]
miR-153 KLF5 neg 26941846 [76]
miR-155 miR-143 pos 26795347 [77]
miR-159 TCF7 neg 26794868 [78]
miR-181c PDPK1 neg 25828099 [79]
miR-185 E2F1 neg 30482236 [80]
miR-18a SREBF1 neg 29988076 [81]
miR-190 SMAD2 neg 29510731 [82]
miR-195 ONECUT2 neg 31118200 [83]
miR-199a LCOR neg 28530657 [84]
miR-200c/141 HIPK1 neg 30613263 [85]
miR-204 PIK3CB neg 30737233 [86]
miR-206 TWF1, MAP 3 K9, SPATA6, IL-11 neg, pos, pos, pos 27435395 [87]
miR-20a MAPK1 neg 29125598 [88]
miR-21 DDX5, PTEN pos 30413718 [89]
MIR210HG miR-1226-3p neg 31399552 [90]
miR-214 miR-148b neg 27328731 [75]
miR-216b-5p PNPO neg 30982780 [91]
miR-218 ZFX neg 31310241 [92]
miR-221 Beclin1 neg 27940575 [93]
miR-24 ING5 neg 28490335 [94]
miR-31 GNA13 neg 25889182 [95]
miR-320b NRP1, ETS2 neg 26178901 [96]
miR-329, miR-362 BCAR1 neg 26337669 [97]
miR-33a ADAM9, ROS1 neg 26507842 [98]
miR-345 KISS1 neg 28981380 [99]
miR-34c EIF5A2, SCA2 neg 29560860 [100]
miR-3609, miR-5096 CDK1 neg 31142736 [7]
miR-375 TNS3, PXN, CCL2 neg 30850595 [101]
miR-424 (322)/503 BCL2, IGF1R neg 28404630 [102]
miR-4306 SIX1, CDC42, VEGFA neg 30867840 [103]
miR-4485-3p CCNB1, CCND1 neg 31142736 [7]
miR-454-3p RPRD1A, AXIN2, DKK3, SFRP1 neg 30809286 [104]
miR-4728 ESR1 neg 29476008 [105]
miR-4766-5p SIRT1 neg 29752439 [106]
miR-484 CDA neg 25643696 [107]
miR-515 NRAS, MARK4, PIK3CB neg 26882547 [108]
miR-548a SIX1 neg 29455928 [109]
miR-548j Tensin1 neg 26949125 [110]
miR-5582-3p LUCAT1, TCF7 neg 31300015 [111]
miR-600 SCD1 neg 28249169 [112]
miR-892b NF-kB, TRAF2, TAB3, TAK1 neg 26747895 [113]
miR-93 NCOA3 neg 28920955 [114]
miR-940 ARHGAP1, FAM134A neg 29440427 [115]
miR-99a Her2 neg 25388283 [116]
MPPED2-AS1 DNMT1, MPPED2 neg 31181813 [117]
NAMPT-AS POU2F2 pos 30940661 [118]
NBR2 AMPK pos 26999735 [119]
NDRG1-OT1 NDRG1 neg 30497328 [120]
NKILA Ik-B neg 25759022 [57]
NONHSAT101069 miR-129-5p neg 31444414 [121]
NORAD S100P neg 30967631 [122]
PDCD4-AS1 PDCD4 pos 30496290 [123]
piR-FTH1 Fth1 neg 30102404 [124]
PIWI-36712 SEPW1P neg 30636640 [125]
PIWIL3 miR-21, miR-45 neg 28094937 [126]
PNUTS miR-205, ZEB1, ZEB2 neg, pos, pos 28825698 [127]
PRLB SIRT1 pos 29752439 [106]
PTENP1 miR-20a, PTEN neg, pos 31196157 [128]
PTV1 BAP-1, CTNNB1 pos 29760406 [129]
PYCARD-AS1 DNMT1, G9 pos 31086376 [130]
RAINs RUNX2 pos 28981843 [131]
RP1 p27 neg 31073122 [132]
SNHG5 miR-154-5p neg 31255976 [133]
SPRY4-IT1 ZNF703 pos 25742952 [134]
ST8SIA6-AS1 PLK1, AURORA pos 31286138 [135]
T3p RISC, NUPR1, PANX2 neg, pos, pos 30397354 [136]
TINCR HER-2, miR-125b, Snail1 Pos, neg, pos 30621694 [137]
TROJAN ZMYND8, ZNF592 neg 30854423 [138]
WDR7–7 GPR30 pos 29096683 [139]
XIST c-Met, miR-503 neg, pos 30028120 [140]
YIYA CDK6, PFKFB3 pos 29967256 [141]

*pos positive interaction, activation, neg negative interaction, repression