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. 2019 Aug 16;100(10):1363–1374. doi: 10.1099/jgv.0.001307

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© 2019 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution License.

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Fig. 4. — Phylogenetic tree of amino acids sequences encoding the coronavirus nucleocapsid protein (N). A partial N protein sequence of BtCoV22/29 and the complete N protein sequence of BtCoV92 were compared to the representative coronavirus species based on (a) the available partial N protein sequence of a betacoronavirus (KX452687) previously detected in E. spelaea and (b) full N protein sequences. Maximum-likelihood trees were constructed using the LG+F amino acid model (best-fit model determined by mega7) with 1000 bootstrap replications. Only bootstrap values >80 % are shown.