Table 3.

Coding potential and putative transcriptional regulatory sequences of BtCoV92

Bt92-CoV ORF	Nucleotide positions (start–end)	No. of nucleotides	Predicted size (aa) of protein	Nucleotide position in genome	TRS sequence	Distance (nt) from TRS to ATG
ORF1a	227–20823	20 598	6866	70–75	TTGAACGAACTAAAA	151
Spike	20777–24601	3825	1275	20729–20734	TTGAACGAACTAGT	41
NS3	24598–25290	693	231	24589–24594	ATAAACGAACAGAA	3
E	25290–25520	231	77	25280–25285	GCAGTCGAACTATA	8
M	25523–26188	666	222	24595–25500	TTGAACGAACAAGA	22
NP	26243–27634	1392	464	26232–26237	TTGAACGAACCAAT	5
NS7a	27670–28272	603	201	27663–27668	TTGAACGAACCAA	1
NS7b	28296–28889	594	198	28290–28295	TTGAACGAACATGA	0
NS7c	28931–29326	396	132	28873–28878	GGTTACGAACATCT	52