Table 1.
TLR domain | N | Length bp (aa) | π | dS (±SE) | dN (±SE) | ω |
---|---|---|---|---|---|---|
LRR ectodomain | 21 | 2,460 (820) | 0.177 ± 0.004 | 0.451 ± 0.023 | 0.150 ± 0.007 | 0.517 |
TM/TIR | 21 | 612 (204) | 0.086 ± 0.006 | 0.409 ± 0.045 | 0.025 ± 0.004 | 0.114 |
All | 21 | 3,072 (1,024) | 0.159 ± 0.004 | 0.442 ± 0.019 | 0.112 ± 0.006 | 0.437 |
aa amino acid, bp base pair, N number of inferred haplotypes, π number of base differences per site, d S number of synonymous substitutions per synonymous site, d N number of nonsynonymous substitutions per nonsynonymous site, SE standard error estimates by bootstrap procedure with 500 replicates estimated by MEGA, ω d N /d S ratio computed by SLAC