Abstract
More than two-thirds of all women diagnosed with epithelial ovarian cancer (EOC) will die from the disease (>14,000 deaths annually), a fact that has not changed considerably in the last three decades. Although the five-year survival rates for most other solid tumors have improved steadily, ovarian cancer remains an exception, making it the deadliest of all gynecological cancers and five times deadlier than breast cancer. When diagnosed early, treatment is more effective, with a five-year survival rate of up to 90%. Unfortunately, most cases are not detected until after the cancer has spread, resulting in a dismal five-year survival rate of less than 30%. Current screening methods for ovarian cancer typically use a combination of a pelvic examination, transvaginal ultrasonography, and serum cancer antigen 125 (CA125), but these have made minimal impact on improving mortality. Thus, there is a compelling unmet need to develop new molecular tools that can be used to diagnose early-stage EOC and/or assist in the clinical management of the disease after a diagnosis, given that over 220,000 women are living with ovarian cancer in the U.S. and are at risk of recurrence. Here, we discuss the state of advancing liquid-based approaches for improving the early detection of ovarian cancer.
Introduction
Ovarian cancers are a heterogeneous group of malignancies arising from or involving the ovary and/or fallopian tubes (1). Ovarian cancers are broadly classified into non-epithelial ovarian cancer (NEOC) and epithelial ovarian cancer (EOC), that latter is attributed to the majority of ovarian cancer-related deaths (2). Overall, EOC is the fifth leading cause of cancer-related death among American women, making it the deadliest cancer of the reproductive system (3). EOC is a heterogeneous disease, comprising several histotypes (serous, ~70%, endometrioid ~10%, clear-cell, ~10% and mucinous, ~3 to 10%) with distinct epidemiologic, molecular, and clinical features. High grade serious carcinomas (HGSC) are estimated to be 50–60% of all ovarian malignancies, and account for half of all epithelial ovarian cancers.
EOCs are diagnosed predominantly at an advanced stage with widespread metastases throughout the peritoneal cavity (4–6). Manifestations of the disease are typically vague and do not become apparent until the disease is advanced and difficult to treat. Thus, ovarian cancer is caught at an early stage only in about one-fifth of all cases according to the National Ovarian Cancer Coalition. Furthermore, no reliable screening tests are currently available for ovarian cancer, and current diagnostic tools for early detection remain inadequate. Early detection of ovarian cancer at a localized stage (Stages 1A and 1B) results in far better disease prognosis: according to the American Cancer Society (2019), the projected 5-year survival rate for these patients is about 92%. However, only 15% of all ovarian cancers are successfully diagnosed at this stage. Patients with advanced stage HGSC have a worst prognosis (~32% and ~15% for 5- and 10-year survival, respectively) compared to patients diagnosed with early-stage HGSC (~71% and ~53% (5- and 10-year survival, respectively) (7). Moreover, 30 years of statistics gathered by the NIH Surveillance, Epidemiology and End Results (SEER) Program, indicate that approximately 70% of patients diagnosed with ovarian cancer will experience disease recurrence after initial benefit from chemotherapy (8). These statistics clearly emphasize the need to develop tools to detect ovarian cancer at an earlier stage.
The two most commonly used screening tests in the clinic are transvaginal ultrasound (TVUS) and blood tests for elevated cancer antigen-125 (CA125) protein levels. It is difficult to distinguish benign from malignant tumors by TVUS, hence the need for more invasive biopsies. On the other hand, CA125 protein levels are typically not elevated in the serum of up to 50% of patients with Stage I ovarian cancer, thereby it is not as reliable for early detection (9). Also, blood tests quantifying CA125 protein level are not specific to ovarian cancer, as CA125 elevation can be potentiated by many factors (10). Unlike breast cancer where a biopsy can be performed for diagnosis, EOC screening requires invasive surgery to make a definitive diagnosis (11,12) and therefore false positive surgeries must be limited to at most 10 per screen-detected cancer, i.e., a positive predictive value (PPV) exceeding 10%, which for the patient is quite unacceptable. Thus, the low prevalence of this cancer in the general postmenopausal population (1 in 2,500) requires an effective screening strategy to have a high sensitivity for early-stage disease (>75%), and a very high combined specificity (99.6%) to achieve a PPV exceeding 10% (11–19). When CA125 is interpreted longitudinally with the risk of ovarian cancer algorithm (ROCA) referring 2% annually at highest risk to TVS, this “2-stage screening strategy” achieved a combined specificity of 99.8%, a 22% PPV – greater than the 10% lower limit, and detected an increased but still modest proportion of EOCs in early stage (11,20,21). In a 2017 landmark study, the United Kingdom Collaborative Trial of Ovarian Cancer Screening (UKCTOCS) compared several screening approaches in over 200,000 postmenopausal women (median follow up of 11.1 years): i) serum CA125 level evaluated using ROCA (50,640 women), ii) annual TVUS screening (50,639 women), or iii) no screening (101,359 women). Unfortunately, like other ovarian cancer screening studies primarily focused on measuring serum CA125 levels (22–27), this study did not show a significant decrease in ovarian cancer mortality (28). This clinical problem highlights the urgent need to expand the class of liquid-based biomarkers to detect a substantially greater proportion of cancers in early stage, while maintaining a 98% annual specificity for referral to imaging (e.g., TVUS).
Liquid-Based Biopsies: Can These Developing Molecular Tools be Used to Improve Early Detection of Cancer?
Pathologic analysis of tumor tissue biopsies has been the gold standard in the initial diagnosis of cancer, but liquid biopsies, which analyze tumor-derived material circulating in the bloodstream and other bodily fluids, are rapidly gaining traction in the clinic. Liquid biopsy is a minimally or non-invasive technology that detects molecular biomarkers using liquid sample without the need for costly or invasive procedures. These tests have considerable potential in oncology, e.g., for early detection of cancer, treatment and recurrence monitoring, and as surrogates for traditional biopsies with the purpose of predicting response to treatments and the development of acquired resistance. A liquid biopsy can provide information about the genetic landscape of all cancerous lesions (primary and metastases) as well as offer the opportunity to systematically track genomic evolution. The liquid biopsy biomarker types are primarily segmented into circulating tumor cells (CTCs), cell-free DNA (cfDNA), and extracellular vesicles (EVs) (Figure 1). The discovery of CTCs dates back to the 1860s, when cells that were morphologically identical to the tumor were identified in the blood of a patient with metastatic cancer (29). Their potential significance was not fully realized until the late 2000’s, when the number of CTCs in the bloodstream were shown to have prognostic significance in various different tumor types, e.g., metastatic breast, metastatic castration-resistant prostate, and metastatic colorectal (30). Another way that tumors release biomarker information is through tumor cell necrosis and the release of dead cells or cell fragments. These cells are engulfed by phagocytes that process the tumor cell DNA into small fragments (160 to 180 base pairs in length) of nucleic acids, which is then released into the bloodstream (31,32). Although levels of tumor DNA have been shown to mirror tumor burden, interpretation is often complicated by the presence of other cell-free DNA derived from non-tumor cells. Therefore, a number of highly sensitive methods have been developed to detect aberrations found in circulating tumor DNA, including mutation, amplification, chromosomal rearrangement, and hypermethylation. A third biomarker, which has been known for years, has re-emerged and is showing great promise. This member of the extracellular vesicle (EV) family, known as exosomes or small EVs, are nano-sized vesicles (30 to 150 nm) of endocytic origin which are produced and released by most cell types under normal physiologic and in diseased states (33,34). Once considered little more than garbage cans whose job was to discard unwanted cellular components, recent discoveries have sparked considerable interest in exosomes as circulating biomarkers. Exosomes are informative molecules that carry cargo representative of their originating cell including nucleic acids, cytokines, membrane-bound receptors, and a wide assortment of other, biologically active lipids and proteins (35–38). This cargo remains functional upon entry or fusion with a recipient cell, thus exosomal transfer is now considered an important form of cell-cell communication in normal and pathological states, such as cancer. Since exosomes can travel systemically throughout the body, efforts are underway to exploit them as potential biomarkers to detect and monitor disease states. In this review, we will focus on the current methods and advancements using liquid-based biopsies which have shown promising potential in the early detection of ovarian cancer.
Figure 1.
A graphical representation of a variety of approaches ovarian cancer researchers can take to evaluate blood-based liquid biopsies for cancer-associated biomarkers to aid in early detection of malignancy.
Circulating Tumor Cells
First observed in 1869 by Thomas Ashworth in the blood of an individual with metastatic disease, circulating tumor cells (CTCs) have long been thought to be an important component of tumor dissemination (29,39,40). CTCs are cancer cells that have detached from the tumor and are found at extremely low levels in the bloodstream. Modern research on CTCs has focused on CTC enumeration and characterization. Some speculate that tumor cell shedding is an early event in tumorigenesis and might be useful for early detection, but few studies have shown utility in this clinical setting. As a blood-based, FDA-approved biomarker, CTCs were thought useful for determining the prognosis of patients with metastatic breast, colorectal, and prostate cancers (41–45). As the only FDA-cleared device for the enumeration of CTCs in whole blood, CellSearch® (Menarini Silicon Biosystems, Inc.) was originally used for the evaluation of CTC numbers in cancer patients to help predict prognosis and overall survival (30). However, clinical enumeration of these circulating cells has become less useful and costly, due to the fact CTC tests are rarely reimbursed by insurance. Regardless, the interest in CTCs continues and many different platforms for CTC isolation have been developed for research as well as clinical use in recent years (46). Nevertheless, CTC isolation and characterization remains technically challenging and progress has been hampered by the difficulty in rapidly and effectively isolating pure populations of CTCs using liquid biopsy.
The three main categories of isolation techniques are immune-affinity-based methods, size/density-based methods, and microfluidic device-based methods (47) (Figure 2). The earliest approaches utilized positive and negative selection for common CTC surface antigens or organ-specific markers to differentiate CTCs from other cell types. In these studies, researchers used antibody-coated beads to positively select CTCs from the cellular milieu or deplete the milieu of other cell types with a negative selection marker. EpCAM, a cell adhesion protein found on epithelial cells, is often used as a positive selection marker for CTCs (48). The most common negative selection marker is CD45 because it is only found on cells of hematopoietic origin. First reported in 2000, the ISET (isolation by size of epithelial tumor cells) system is based on cell size filtration and has been shown to effectively recover CTCs for diagnostic cytopathologic analysis (49). However, smaller circulating tumor cells less than 8 μm in diameter can be lost using this method, due to the selective pore size. Microfluidic devices offer several attractive advantages for CTC-based studies, such as continuous sample processing using a small volume to reduce loss and integration of downstream analyses on the chip itself. These devices can also reduce hands-on time and increase consistency of heterogeneous CTCs profiles (50). Some microfluidic devices integrate existing CTC isolation techniques within their design, such as the size-dictated immunocapture chip (SDI-Chip) (51). The SDI-chip is composed of two mirrored anti-EpCAM antibody-coated micropillar arrays that selectively enhance the interaction of CTCs with the selection antibodies, resulting in efficient capture of CTCs based on the principle of deterministic lateral displacement (52). The disadvantage to the EpCAM-based capture is that not all CTCs express EpCAM (53). In an effort to move away from the bias introduced by affinity-based isolation, researchers have begun to focus on label-free surface expression-independent microfluidic devices to isolate CTCs. A label-free approach is optimal because circulating tumor cells are very heterogeneous and fluid in their gene expression, making any affinity-based approach biased towards cells expressing a certain marker. Several label-free CTC separation techniques have arisen in recent years including a microfluidic flow fractionation approach, acoustic-based separation, and deterministic lateral displacement separation (52,54,55). The Labyrinth device developed by Lin et al. in 2017 is a label-free circular microfluidic chamber that uses a hydrodynamic maze to isolate CTCs by size (56). The device functions by flowing blood through a labyrinth (hence the name) of 56 sharp turns, which results in size-based enrichment of CTCs depleted of hematopoietic cells. Improvements can be made on the purity of resultant CTCs by double Labyrinth separation. Labyrinth output can even be used with various downstream single-cell analysis tools including BioMark Real-Time PCR System (Fluidigm), DEPArray (Silicon Biosystems), and droplet digital PCR (Rain-dance).
Figure 2.
Examples of methods to capture circulating tumor cell from whole blood.
CTC enumeration data can only provide limited insight into the underlying biology of malignant disease. More recent research efforts have been focused on the molecular characterization and functional analysis of CTCs. Using less than 1 mL of blood, Racila et al. demonstrated that 12 of 14 patients with clinically organ-confined breast cancers and 3 of 3 patients with organ-confined prostate cancers had excess epithelial cells detected in their blood (57). However, the diagnostic utility of CTCs in ovarian cancer has been decidedly underwhelming. In the first studies lead by us, CTCs (as circulating endothelial cells/circulating endothelial progenitors), were found to be rare in ovarian cancer patients and were not overly informative when evaluated along with activity of molecular targeted therapies (58,59). In a 2018 study, CTCs were detected in only 5 out of 29 patients (17.2%) with proven primary ovarian cancer (Table 1). CTCs were shown to be more prevalent in patients with metastases to the ovary, rather than in primary ovarian cancer (43). Although CTCs may not be useful as early detection biomarkers, CTC status in ovarian cancer is associated with overall survival and progression-free survival according to a recent meta-analysis of 11 publications and 1,129 patients (60).
Table 1.
Examples of liquid-based biopsy studies to detect ovarian cancer using ctDNA and CTCs
| Platform Used | Selection Parameters | Case Size | Control Size | Sensitivity* | Specificity* | CI (95%) | Ref. | ||
|---|---|---|---|---|---|---|---|---|---|
| Circulating tumor cells (CTCs) | CellSearch® | EpCAM | Histological diagnosis of ovarian cancer | n=29 | n=17* Benign Disease | 25.7% | 100% |
Se = 12.5% ± 43.3% Sp = 76.8% ± 100% |
(43) |
| Cancer with metastases to the ovary | n=5 | ||||||||
| Circulating tumor DNA (ctDNA) | Microarray (MethDet 56) | Promoters: RASSF1A, CALCA, EP300 | Benign disease | n=30 | n=30 | 90% | 86.7% |
Se = 80% ± 100% Sp = 66.7% ± 96.7% |
(75) |
| Ovarian cancer | n=30 | ||||||||
| Microfluidic digital PCR | TP53 mutant allele fraction | Ovarian | n=32 | n=5 | 71% | 88% |
Se = 42% ± 92% Sp = 64% ± 99% |
(71) | |
| Primary peritoneal | n=5 | ||||||||
| Fallopian tube | n=3 | ||||||||
| Ultra-high coverage Bi-sulfite sequencing | Unspecified 3 DNAme marker panel | Ovarian cancer | n=41 | n=21 | 41.4% | 90.7% |
Se = 24.1% ± 60.9% Sp = 84.3% ± 94.8% |
(76) | |
| Other Cancer | n=37 | ||||||||
| Non-epithelial tumors | n=5 | ||||||||
| Borderline | n=27 | ||||||||
| Benign tumors | n=119 | ||||||||
Sensitivity (Se) and specificity (Sp) pair values listed correspond to a specific decision cutoff utilized in each study.
Pairs of sensitivity and specificity in this table are not directly comparable with each other since they are calculated based on different cutoffs throughout.
Circulating Tumor DNA
It was reported for the first time in 1977 by Leon et al. that cancer patients have increased levels of free DNA in their blood serum (61). Cell-free DNA (cfDNA) broadly refers to all circulating DNA, whereas circulating tumor DNA (ctDNA) is specifically tumor-derived as the name suggests. Unfortunately, typical DNA isolation methods do not distinguish DNA by its origin, so scientists have developed several strategies to increase the proportion of ctDNA isolated from serum or plasma. Enrichment for ctDNA is optimal because it increases the likelihood of uncovering biomarkers specific to the cellular heterogeneity of the tumor. Apoptotic DNA fragmentation is thought to be the main source of ctDNA due to its average size of 70–200 base pairs, which corresponds to the length of DNA around a nucleosome (62). The amount of circulating tumor DNA can be highly variable. ctDNA can comprise ~0.01% ± 90% of total circulating DNA (63–65). Even so, ctDNA has been used to detect tumor-specific mutations, loss of heterozygosity, DNA integrity, microsatellite alterations, and epigenetic alterations (62,66). Importantly, ctDNA can be used to quantify the level of disease burden and reveal the genomic landscape of the tumor. Researchers have estimated that the half-life of ctDNA ranges from 16 minutes to 2.5 hours, based on the degradation kinetics of DNA in circulation (67–69). This makes ctDNA a temporal snap-shot of tumor status. Even with this short half-life, promising results have been shown in colorectal cancer, where >60% of early stage tumors can be detected through sensitive mutational analysis of DNA fragments in plasma (64). Figure 3 depicts typical analysis methods used to evaluate ctDNA and their required sensitivity as well as various applications.
Figure 3.
Sensitivity, methods, and applications for circulating tumor DNA analysis. Overview of the most common applications and techniques for ctDNA analysis. ctDNA represented by red DNA strands in blood collection tubes (adapted from (103)).
As we move toward the future, more and more advancements are taking place to increase the sensitivity of current DNA-based analysis methods such as real-time PCR, microfluidic digital-drop PCR, BEAMing, Safe-SeqS, CAPP-Seq, and other next-generation sequencing techniques (70). In a recent retrospective study, researchers determined that detection of mutations in TP53 using high-grade serous ovarian carcinoma patient plasma has the potential to assess clinical prognosis and response. This study also demonstrated that the amount of ctDNA correlated with tumor volume as determined by 3D volume reconstruction from computed tomography images (71). Overall, all cancer patients evaluated in this study with a tumor volume greater than 20 cm3 had reliably detectable TP53 mutations; however, the role of ctDNA mutation screening for early detection remains unproven. Using a mathematical model, researchers postulate that tumors in the millimeter diameter range can only be detected using secreted blood biomarkers under ideal conditions of extremely high rates of biomarker secretion and essentially zero background from healthy cells (72,73). Thus, very sensitive technology is necessary to detect ctDNA from early stage ovarian cancer.
Epigenetic changes can also be reliably detected in ctDNA. Aberrant methylation in circulating DNA has been shown in many cancer types (74). Cancer cells use promoter methylation to deregulate gene expression and can be informative as a non-invasive biomarker. The hypermethylation of important DNA repair genes is often an early step in carcinogenesis. In 2011, Liggett et al. determined that the methylation of three promoters differentiated ovarian cancer patients from healthy controls with a sensitivity of 90% and a specificity of 86.7%. These methylated genes, RASSF1A, CALCA, and EP300, are associated with tumor suppression, calcium regulation, and histone acetylation, respectively. In addition, promoter methylation of RASSF1A and PGR-PROX was informative for distinguishing ovarian cancer from benign ovary disease (sensitivity 80%, specificity 73.3%) (75). Methylation patterns found in ctDNA have even shown the potential to diagnose a subset of ovarian cancers up to two years in advance of elevated CA-125 levels (Table 1) (76).
It is thought that solid malignant neoplasms shed DNA into the circulatory system most often by necrosis, rather than apoptosis as in normal tissue (77). Necrosis typically results in larger and less uniform DNA fragments than apoptosis. Due to this, DNA integrity is increased in cancer and can be analyzed using ctDNA. Using the most common mobile element in the human genome, Alu repeats, researchers can derive a DNA integrity index that can differentiate cancer patients from healthy individuals by isolating circulating DNA from plasma. This approach was used by Wang and colleagues to establish a cut-off index value of 0.59, meaning all samples above this index are likely malignant (77). This study demonstrated inadequacies in sensitivity of the assay (62%); however, specificity was 100% (Table 1). DNA integrity analysis represents a less-expensive and simpler alternative to DNA sequencing.
Extracellular vesicles in ovarian cancer
Extracellular vesicles (EVs) compared to circulating tumor cells and cell-free DNA are considered a relatively new class of cancer biomarker. EVs are secreted by cells as a form of intercellular communication. These EVs can shuttle nucleic acids, lipids, and proteins from their cell of origin to surrounding cells to regulate the function of other cells (78). EVs are classified according to size (from a few nanometers to a few micrometers) and sub-cellular origin (79). A subtype of EVs, termed exosomes, are endocytic in origin and include 60–80 nm small exosomes (Exo-S), as well as 90–120 nm large exosomes (Exo-L) (80). In general, the term “exosomes” is broadly used to refer to a heterogenous mixture of small EVs (sEVs) that are less than 200 nm in size; this is due to the fact that widely used purification methods (such as differential ultracentrifugation) cannot definitively isolate EV class based on sub-cellular origin (81).
The role of exosomes in cancer metastasis has been demonstrated in various cancer types (82–85), establishing a rationale for exploring exosome-based diagnostics. In the ovarian cancer context, our lab has shown that tumor-derived exosomes from CP30 and CP70, which are both platinum-resistant ovarian cancer cell lines, imparted platinum-resistance to a platinum-sensitive cell line (A2780) (86). In another in vitro study, epithelial ovarian cancer cells were shown to secrete exosomes that affected the phenotype of mesothelial cells of the peritoneum via transfer of CD44, a cell surface glycoprotein that plays a role in cell adhesion and migration. The mesothelial cells, in turn, increased CD44 surface and MMP-9 secretion, resulting in the degradation of the extracellular matrix and promoting ovarian cell invasion (87). Collectively, these studies suggest that exosomes represent a general mechanism by which one cell type can modulate the phenotype and characteristics of neighboring cells.
Ovarian tumor-derived EVs are not only rich in proteins but these contain microRNAs (miRNAs). miRNAs are small non-coding RNAs that can target messenger RNA thereby altering gene expression. miRNA profiling of EpCAM captured exosomes from ovarian cancer patients’ serum identified miR-21, miR-141, miR200a, miR200b, miR-200c, miR-203, miR-205, and miR-214 to be elevated compared to controls. A high expression of let-7 has been correlated to ovarian cancer cell invasiveness in SKOV3 (88). It has been demonstrated that miR-1246 expression in ovarian tumor-derived exosomes can aid tumor growth by downregulating Cav1 expression, thereby increasing P-glycoprotein expression in infiltrating pro-tumorigenic immune cells (M2-type macrophages) (89). This makes the tumor microenvironment favorable since this confers drug resistance to paclitaxel (89). In addition, other studies have shown that miRNAs from ovarian cancer tumor-derived EVs can confer drug resistance through other pathways (82,90–92).
Since there are various evidence of tumor-derived EVs contributing to the progression of ovarian cancer (87,93,94), it is logical to assess the potential of EVs for diagnostics. Recently, several technologies have been developed to capture exosomes from minute volumes of starting material to surpass the problem of requiring larger sample volumes when using conventional methods such as ELISA and immunoblotting (Table 2). Technologies such as microfluidic chips and the nano-plasmonic exosome (nPLEX) platform can be conjugated to antibodies to allow for capture and profiling of exosomes. One study has assessed exosomes derived from ascites of ovarian cancer patients using the nPLEX platform (95). Initially, molecular profiling of antibodies was used to coat the surface of nanoholes using selected ovarian cancer markers based from literature. Ovarian cell lines and exosomes derived from the same cell lines were then profiled. The authors found that the combination of EpCAM and CD24 can distinguish ovarian tumor-derived exosomes with a detection accuracy of 97%. Furthermore, it was found that these two markers are highly expressed in the ascites of ovarian cancer patients (n=20) compared to the control population (n=10), which consisted of ascites from non-malignant conditions (95). These findings correspond with a previous report that identified EpCAM and CD24 are found in exosomes of cultured cell lines and malignant ascites (96). Our lab was the first to demonstrate the capture of exosomes directly from the plasma of ovarian cancer patients using a microfluidic chip (97). This was followed by the development of a microfluidic chip called ExoSearch (Figure 4) by Zhao et al. (2016), wherein exosomes from plasma of healthy and ovarian cancer patients were captured using anti-CA-125, anti-EpCAM (Epithelial Cell Adhesion Molecule) and anti-CD24 (cluster of differentiation 24 or heat stable antigen CD24) (98). In this study, it was observed that exosomal CA125 and EpCAM may be used to discriminate ovarian cancer patients from the healthy controls(98). Most recently, our group together with Zhang et al. (2019), has reported the development of an ultrasensitive analysis of exosomes using a 3D nanostructured herringbone chip (nano-HB). In this small case/control study, we report that exo-folate receptor alpha as well as exo-EpCAM and exo-CD24 could be detected in small volumes of plasma samples (as little as 2 μL) and could significantly distinguish ovarian cancer patients from cancer-free controls (AUC=1) (Figure 5) (99). These types of devices have yet to be assessed under the rigor of clinical trials or in longitudinal samples from asymptotic patients who latter develop cancer, but clearly hold promise.
Table 2.
Comparison of studies using circulating EVs to detect ovarian cancer
| Platform Used | Selection Parameters | Case Size | Control Size | Area Under the Curve (AUC) | Sensitivity* | Specificity* | Ref. |
|---|---|---|---|---|---|---|---|
| nPLEX | EpCAM CD24 EpCAM + CD24 CD63 |
20 | 10 | 0.968 0.900 0.995 0.670 |
90%** 80%** 95%** 75%** |
100%** 100%** 100%** 60%** |
(95) |
| Microfluidic chip (ExoSearch) | EpCAM CA-125 CD24 |
15 | 5 | 1.00 1.00 0.91 |
93%* 93%* 93%* |
100%* 100%* 80%* |
(98) |
| Microfluidic chip (nanoHB) | EpCAM CD24 FR-α NTA |
20 | 10 | 1.00 1.00 0.995 1.00 |
100%* 100%* 95%* 69%* |
100%* 100%* 100%* 86%* |
(99) |
Sensitivity and specificity pair values listed correspond to a specific decision cutoff utilized in each study.
The sensitivity and specificity correspond to the maximized Youden index.
As reported by each study.
Pairs of sensitivity and specificity in this table are not directly comparable with each other since they are calculated based on different cutoffs throughout.
Figure 4.
a) Schematic of the ExoSearch chip. Bright-field microscopy images of b) Y-shaped injector, c) mixer, d) immunomagnetic bead, and e) TEM of exosomes captured on the surface of the immunomagnetic bead (reprinted with permission from (98)).
Figure 5.
a) Schematic of the 3D nanostructured herringbone chip (nano-HB), b) Method of nano-HB chip fabrication, c) A nano-HB chip with magnified SEM images in the middle, and left d) testing clinical samples on the nano-HB chip. CD24, EpCAM and FRα on exosomes derived from the plasma of ovarian cancer patients (n=20) and control population (n=10) were quantified. Error bars indicate s.d. (n = 3). e) Plot of the exosomal protein concentration captured on the nano-HB chip versus ovarian cancer staging, with stage I/II considered as early and stage III/IV as advanced (reprinted with permission from (102)).
Conclusion
Liquid-based approaches to detect cancer, although gaining traction, are not new. Complete blood count, i.e., CBCs, including WBCs, RBCs, and platelets are used to help diagnose blood disorders, including leukemia and lymphoma. Prostate-specific antigen (PSA) is used to help diagnosis prostate cancer, while calcitonin, alpha-fetoprotein and human chorionic gonadotropin are used to diagnosis medullary thyroid cancer, liver cancer, and germ cell tumors, such as testicular cancer and ovarian cancer, respectively. Liquid-based biopsies are likely here to stay and as technologies improve so will their clinical utility. These types of assays, which are considerably less invasive when compared to the tissue biopsy procedure, will help to further advance personalized targeted therapy and immunotherapy by offering a source of easily obtainable material for mutation analysis. Liquid biopsies also have the potential to be useful in efficacy assessment, especially if imaging cannot be used or the interpretation is problematic, and in real-time monitoring of molecular profiles and clonal evolution in patients undergoing cancer therapy to detect metastatic relapse or metastatic progression as well as mechanisms of resistance.
Even with the growing excitement surrounding this area of translational research, significant improvements in liquid biopsy platforms and techniques will be required to advance the promises of precision cancer medicine. At present, a liquid biopsy test in itself cannot simply replace the gold standard tissue biopsy-based test; they primarily serve as a complimentary test. As such, there are several remaining challenges impeding the wider adoption of liquid biopsy-based clinical tests. First, determining the level of sensitivity of a given liquid-based assay. It is well established that CTCs, ctDNA, and tumor-derived EVs are relatively rare compared to the number of “other molecules” found in a blood or bodily fluid sample, therefore major hurdles remain to improve the test’s detection ability. Furthermore, it is not clear if a given test can accurately dissect the heterogeneity of a tumor and identify the “bad actors” among the other tumor subclones. Secondly, the majority of liquid biopsy assays lack extensive clinical validation resulting in limited reimbursements and utilization of these next-generation tests within the medical community (100). It is therefore, essential to rigorously validate and demonstrated to both providers and payers the value of liquid biopsies in the clinical setting before they impact clinical practice and are routinely reimbursed. As we move toward the future, the technologies supporting the development of liquid biopsy assays will continue to improve and in turn the sensitivity and specificity of the test. Currently, strides are being made in improving single circulating tumor cell capture approaches and platforms. With the adoption of digital drop PCR, researchers are able to increase the sensitivity of detection of low-abundance mutations in the circulating tumor DNA (101). Microfluidic technologies are also proving suitable for isolation of low-abundance cancer associated EVs/exosomes (102).
In summary, developing effective screening tests for early detection of ovarian cancer remains one of the most significant unmet needs in the diagnosis and treatment of this disease. It is vital to identify new liquid-based tests and to develop an effective strategy to identify ovarian cancer at its earliest stages so women stand the best chance for successful treatment and improved survival. To implement a population-wide ovarian cancer screening strategy, there must be evidence that the test is both sensitive enough to detect the cancer early and specific enough not to cause harm to healthy people. It is clear that when cancer, any cancer, is detected late, i.e., after it has metastasized to other parts of the body, the outcomes are generally grim. These new liquid-based platforms represent potentially valuable clinical tools to evaluate various circulating biomarkers at a specificity and sensitivity necessary to detect ovarian cancer while it is still localized. In the next decade, liquid-based biopsies will become important clinical tools for cancer screening, diagnosis, prognosis evaluation, drug response predictions, and disease monitoring. Although the analytical validity and clinical utility of such tools must be rigorously established before this potential can be fully realized. Successful “bench to bedside” transition will require extensive clinical validation, which demonstrates a significant decrease in the mortality of women diagnosed with ovarian cancer.
Acknowledgements
This report was supported in part by The Kansas Institute for Precision Medicine (GM130423 to A.K.G.), a graduate student award from the OVERRUN Ovarian Cancer Foundation (to C.T.) and the Honorable Tina Brozman Foundation, Inc. (Tina’s Wish to A.K.G.). A.K.G. is the Chancellors Distinguished Chair in Biomedical Sciences.
References
- 1.Cho KR, Shih Ie M. Ovarian cancer. Annu Rev Pathol 2009;4:287–313 doi 10.1146/annurev.pathol.4.110807.092246. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2.Kurman RJ, Shih Ie M. The Dualistic Model of Ovarian Carcinogenesis: Revisited, Revised, and Expanded. Am J Pathol 2016;186(4):733–47 doi 10.1016/j.ajpath.2015.11.011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 3.Siegel RL, Miller KD, Jemal A. Cancer statistics, 2018. CA Cancer J Clin 2018;68(1):7–30 doi 10.3322/caac.21442. [DOI] [PubMed] [Google Scholar]
- 4.Sahdev A, Hughes JH, Barwick T, Rockall AG, Gallagher CJ, Reznek RH. Computed tomography features of recurrent ovarian carcinoma according to time to relapse. Acta Radiol 2007;48(9):1038–44 doi 10.1080/02841850701557255. [DOI] [PubMed] [Google Scholar]
- 5.Hirose S, Tanabe H, Nagayoshi Y, Hirata Y, Narui C, Ochiai K, et al. Retrospective analysis of sites of recurrence in stage I epithelial ovarian cancer. J Gynecol Oncol 2018;29(3):e37 doi 10.3802/jgo.2018.29.e37. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 6.Guth U, Arndt V, Stadlmann S, Huang DJ, Singer G. Epidemiology in ovarian carcinoma: Lessons from autopsy. Gynecol Oncol 2015;138(2):417–20 doi 10.1016/j.ygyno.2015.05.013. [DOI] [PubMed] [Google Scholar]
- 7.Kim J, Park EY, Kim O, Schilder JM, Coffey DM, Cho CH, et al. Cell Origins of High-Grade Serous Ovarian Cancer. Cancers (Basel) 2018;10(11) doi 10.3390/cancers10110433. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 8.Giornelli GH. Management of relapsed ovarian cancer: a review. Springerplus 2016;5(1):1197 doi 10.1186/s40064-016-2660-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 9.Scholler N, Urban N. CA125 in ovarian cancer. Biomark Med 2007;1(4):513–23 doi 10.2217/17520363.1.4.513. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 10.Sevinc A, Adli M, Kalender ME, Camci C. Benign causes of increased serum CA-125 concentration. Lancet Oncol 2007;8(12):1054–5 doi 10.1016/S1470-2045(07)70357-1. [DOI] [PubMed] [Google Scholar]
- 11.Lu KH, Skates S, Hernandez MA, Bedi D, Bevers T, Leeds L, et al. A 2-stage ovarian cancer screening strategy using the Risk of Ovarian Cancer Algorithm (ROCA) identifies early-stage incident cancers and demonstrates high positive predictive value. Cancer 2013;119(19):3454–61 doi 10.1002/cncr.28183. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 12.Jelovac D, Armstrong DK. Recent progress in the diagnosis and treatment of ovarian cancer. CA Cancer J Clin 2011;61(3):183–203 doi 10.3322/caac.20113. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 13.Rein BJ, Gupta S, Dada R, Safi J, Michener C, Agarwal A. Potential markers for detection and monitoring of ovarian cancer. J Oncol 2011;2011:475983 doi 10.1155/2011/475983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 14.Urban N, Drescher C. Potential and limitations in early diagnosis of ovarian cancer. Adv Exp Med Biol. 2008/June/13 ed. Volume 6222008 p 3–14. [DOI] [PubMed] [Google Scholar]
- 15.Bast RC Jr., Brewer M, Zou C, Hernandez MA, Daley M, Ozols R, et al. Prevention and early detection of ovarian cancer: mission impossible? Recent results in cancer research Fortschritte der Krebsforschung Progres dans les recherches sur le cancer 2007;174:91–100. [DOI] [PubMed] [Google Scholar]
- 16.Cohen JG, White M, Cruz A, Farias-Eisner R. In 2014, can we do better than CA125 in the early detection of ovarian cancer? World J Biol Chem 2014;5(3):286–300 doi 10.4331/wjbc.v5.i3.286. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Jacobs I, Bast RC Jr. The CA 125 tumour-associated antigen: a review of the literature. Human reproduction 1989;4(1):1–12. [DOI] [PubMed] [Google Scholar]
- 18.Jacobs I, Oram D. Prevention of ovarian cancer: a survey of the practice of prophylactic oophorectomy by fellows and members of the Royal College of Obstetricians and Gynaecologists. British journal of obstetrics and gynaecology 1989;96(5):510–5. [DOI] [PubMed] [Google Scholar]
- 19.Skates SJ, Xu FJ, Yu YH, Sjovall K, Einhorn N, Chang Y, et al. Toward an optimal algorithm for ovarian cancer screening with longitudinal tumor markers. Cancer 1995;76(10 Suppl):2004–10. [DOI] [PubMed] [Google Scholar]
- 20.Pinsky PF, Zhu C, Skates SJ, Black A, Partridge E, Buys SS, et al. Potential effect of the risk of ovarian cancer algorithm (ROCA) on the mortality outcome of the Prostate, Lung, Colorectal and Ovarian (PLCO) trial. International journal of cancer Journal international du cancer 2013;132(9):2127–33 doi 10.1002/ijc.27909. [DOI] [PubMed] [Google Scholar]
- 21.Menon U, Ryan A, Kalsi J, Gentry-Maharaj A, Dawnay A, Habib M, et al. Risk Algorithm Using Serial Biomarker Measurements Doubles the Number of Screen-Detected Cancers Compared With a Single-Threshold Rule in the United Kingdom Collaborative Trial of Ovarian Cancer Screening. Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2015;33(18):2062–71 doi 10.1200/JCO.2014.59.4945. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Hogg R, Friedlander M. Biology of epithelial ovarian cancer: implications for screening women at high genetic risk. J Clin Oncol 2004;22(7):1315–27 doi 10.1200/JCO.2004.07.179. [DOI] [PubMed] [Google Scholar]
- 23.Chan A, Gilks B, Kwon J, Tinker AV. New insights into the pathogenesis of ovarian carcinoma: time to rethink ovarian cancer screening. Obstet Gynecol 2012;120(4):935–40 doi 10.1097/AOG.0b013e318269b8b1. [DOI] [PubMed] [Google Scholar]
- 24.Buys SS, Partridge E, Black A, Johnson CC, Lamerato L, Isaacs C, et al. Effect of screening on ovarian cancer mortality: the Prostate, Lung, Colorectal and Ovarian (PLCO) Cancer Screening Randomized Controlled Trial. JAMA 2011;305(22):2295–303 doi 10.1001/jama.2011.766. [DOI] [PubMed] [Google Scholar]
- 25.Menon U Ovarian cancer screening has no effect on disease-specific mortality. Evid Based Med 2012;17(2):47–8 doi 10.1136/ebm.2011.100163. [DOI] [PubMed] [Google Scholar]
- 26.Henderson JT, Webber EM, Sawaya GF. Screening for Ovarian Cancer: Updated Evidence Report and Systematic Review for the US Preventive Services Task Force. JAMA 2018;319(6):595–606 doi 10.1001/jama.2017.21421. [DOI] [PubMed] [Google Scholar]
- 27.Kobayashi H, Yamada Y, Sado T, Sakata M, Yoshida S, Kawaguchi R, et al. A randomized study of screening for ovarian cancer: a multicenter study in Japan. Int J Gynecol Cancer 2008;18(3):414–20 doi 10.1111/j.1525-1438.2007.01035.x. [DOI] [PubMed] [Google Scholar]
- 28.Jacobs IJ, Menon U, Ryan A, Gentry-Maharaj A, Burnell M, Kalsi JK, et al. Ovarian cancer screening and mortality in the UK Collaborative Trial of Ovarian Cancer Screening (UKCTOCS): a randomised controlled trial. Lancet 2016;387(10022):945–56 doi 10.1016/S0140-6736(15)01224-6. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 29.Ashworth T A case of cancer in which cells similar to those in the tumours were seen in the blood after death. Australasian Medical Journal 1869;14:146–7. [Google Scholar]
- 30.Miller MC, Doyle GV, Terstappen LW. Significance of Circulating Tumor Cells Detected by the CellSearch System in Patients with Metastatic Breast Colorectal and Prostate Cancer. J Oncol 2010;2010:617421 doi 10.1155/2010/617421. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 31.Thierry AR, El Messaoudi S, Gahan PB, Anker P, Stroun M. Origins, structures, and functions of circulating DNA in oncology. Cancer Metastasis Rev 2016;35(3):347–76 doi 10.1007/s10555-016-9629-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 32.Jahr S, Hentze H, Englisch S, Hardt D, Fackelmayer FO, Hesch RD, et al. DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells. Cancer Res 2001;61(4):1659–65. [PubMed] [Google Scholar]
- 33.Raposo G, Stoorvogel W. Extracellular vesicles: exosomes, microvesicles, and friends. J Cell Biol 2013;200(4):373–83 doi 10.1083/jcb.201211138. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Simons M, Raposo G. Exosomes--vesicular carriers for intercellular communication. Curr Opin Cell Biol 2009;21(4):575–81 doi 10.1016/j.ceb.2009.03.007. [DOI] [PubMed] [Google Scholar]
- 35.Wubbolts R, Leckie RS, Veenhuizen PT, Schwarzmann G, Mobius W, Hoernschemeyer J, et al. Proteomic and biochemical analyses of human B cell-derived exosomes. Potential implications for their function and multivesicular body formation. J Biol Chem 2003;278(13):10963–72 doi 10.1074/jbc.M207550200. [DOI] [PubMed] [Google Scholar]
- 36.Hemler ME. Targeting of tetraspanin proteins--potential benefits and strategies. Nat Rev Drug Discov 2008;7(9):747–58 doi 10.1038/nrd2659. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 37.Hemler ME. Tetraspanin proteins mediate cellular penetration, invasion, and fusion events and define a novel type of membrane microdomain. Annu Rev Cell Dev Biol 2003;19:397–422 doi 10.1146/annurev.cellbio.19.111301.153609. [DOI] [PubMed] [Google Scholar]
- 38.Théry C, Regnault A, Garin J, Wolfers J, Zitvogel L, Ricciardi-Castagnoli P, et al. Molecular Characterization of Dendritic Cell-Derived Exosomes. The Journal of Cell Biology 1999;147(3):599–610 doi 10.1083/jcb.147.3.599. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Meropol NJ. The significance of circulating tumor cells as prognostic markers for colon cancer. Clin Adv Hematol Oncol 2009;7(4):247–8. [PubMed] [Google Scholar]
- 40.Dotan E, Cohen SJ, Alpaugh KR, Meropol NJ. Circulating tumor cells: evolving evidence and future challenges. Oncologist 2009;14(11):1070–82 doi 10.1634/theoncologist.2009-0094. [DOI] [PubMed] [Google Scholar]
- 41.Cohen SJ, Punt CJ, Iannotti N, Saidman BH, Sabbath KD, Gabrail NY, et al. Prognostic significance of circulating tumor cells in patients with metastatic colorectal cancer. Ann Oncol 2009;20(7):1223–9 doi 10.1093/annonc/mdn786. [DOI] [PubMed] [Google Scholar]
- 42.Cristofanilli M, Budd GT, Ellis MJ, Stopeck A, Matera J, Miller MC, et al. Circulating tumor cells, disease progression, and survival in metastatic breast cancer. N Engl J Med 2004;351(8):781–91 doi 10.1056/NEJMoa040766. [DOI] [PubMed] [Google Scholar]
- 43.Lou E, Vogel RI, Teoh D, Hoostal S, Grad A, Gerber M, et al. Assessment of Circulating Tumor Cells as a Predictive Biomarker of Histology in Women With Suspected Ovarian Cancer. Lab Med 2018;49(2):134–9 doi 10.1093/labmed/lmx084. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 44.Cohen SJ, Alpaugh RK, Gross S, O’Hara SM, Smirnov DA, Terstappen LW, et al. Isolation and characterization of circulating tumor cells in patients with metastatic colorectal cancer. Clin Colorectal Cancer 2006;6(2):125–32 doi 10.3816/CCC.2006.n.029. [DOI] [PubMed] [Google Scholar]
- 45.Cohen SJ, Punt CJ, Iannotti N, Saidman BH, Sabbath KD, Gabrail NY, et al. Relationship of circulating tumor cells to tumor response, progression-free survival, and overall survival in patients with metastatic colorectal cancer. J Clin Oncol 2008;26(19):3213–21 doi 10.1200/JCO.2007.15.8923. [DOI] [PubMed] [Google Scholar]
- 46.Zhang J, Chen K, Fan ZH. Circulating Tumor Cell Isolation and Analysis. Adv Clin Chem 2016;75:1–31 doi 10.1016/bs.acc.2016.03.003. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 47.Gwak H, Kim J, Kashefi-Kheyrabadi L, Kwak B, Hyun KA, Jung HI. Progress in Circulating Tumor Cell Research Using Microfluidic Devices. Micromachines (Basel) 2018;9(7) doi 10.3390/mi9070353. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 48.de Wit S, van Dalum G, Lenferink AT, Tibbe AG, Hiltermann TJ, Groen HJ, et al. The detection of EpCAM(+) and EpCAM(−) circulating tumor cells. Sci Rep 2015;5:12270 doi 10.1038/srep12270. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 49.Vona G, Sabile A, Louha M, Sitruk V, Romana S, Schütze K, et al. Isolation by Size of Epithelial Tumor Cells. The American Journal of Pathology 2000;156(1):57–63 doi 10.1016/s0002-9440(10)64706-2. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 50.Bulfoni M, Turetta M, Del Ben F, Di Loreto C, Beltrami AP, Cesselli D. Dissecting the Heterogeneity of Circulating Tumor Cells in Metastatic Breast Cancer: Going Far Beyond the Needle in the Haystack. Int J Mol Sci 2016;17(10) doi 10.3390/ijms17101775. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 51.Ahmed MG, Abate MF, Song Y, Zhu Z, Yan F, Xu Y, et al. Isolation, Detection, and Antigen-Based Profiling of Circulating Tumor Cells Using a Size-Dictated Immunocapture Chip. Angew Chem Int Ed Engl 2017;56(36):10681–5 doi 10.1002/anie.201702675. [DOI] [PubMed] [Google Scholar]
- 52.McGrath J, Jimenez M, Bridle H. Deterministic lateral displacement for particle separation: a review. Lab Chip 2014;14(21):4139–58 doi 10.1039/c4lc00939h. [DOI] [PubMed] [Google Scholar]
- 53.Pantel K, Speicher MR. The biology of circulating tumor cells. Oncogene 2016;35(10):1216–24 doi 10.1038/onc.2015.192. [DOI] [PubMed] [Google Scholar]
- 54.Li P, Mao Z, Peng Z, Zhou L, Chen Y, Huang PH, et al. Acoustic separation of circulating tumor cells. Proc Natl Acad Sci U S A 2015;112(16):4970–5 doi 10.1073/pnas.1504484112. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 55.Hyun KA, Kwon K, Han H, Kim SI, Jung HI. Microfluidic flow fractionation device for label-free isolation of circulating tumor cells (CTCs) from breast cancer patients. Biosens Bioelectron 2013;40(1):206–12 doi 10.1016/j.bios.2012.07.021. [DOI] [PubMed] [Google Scholar]
- 56.Lin E, Rivera-Baez L, Fouladdel S, Yoon HJ, Guthrie S, Wieger J, et al. High-Throughput Microfluidic Labyrinth for the Label-free Isolation of Circulating Tumor Cells. Cell Syst 2017;5(3):295–304 e4 doi 10.1016/j.cels.2017.08.012. [DOI] [PubMed] [Google Scholar]
- 57.Racila E, Euhus D, Weiss AJ, Rao C, McConnell J, Terstappen LW, et al. Detection and characterization of carcinoma cells in the blood. Proc Natl Acad Sci U S A 1998;95(8):4589–94. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 58.Behbakht K, Sill MW, Darcy KM, Rubin SC, Mannel RS, Waggoner S, et al. Phase II trial of the mTOR inhibitor, temsirolimus and evaluation of circulating tumor cells and tumor biomarkers in persistent and recurrent epithelial ovarian and primary peritoneal malignancies: a Gynecologic Oncology Group study. Gynecol Oncol 2011;123(1):19–26 doi 10.1016/j.ygyno.2011.06.022. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 59.Schilder RJ, Sill MW, Lankes HA, Gold MA, Mannel RS, Modesitt SC, et al. A phase II evaluation of motesanib (AMG 706) in the treatment of persistent or recurrent ovarian, fallopian tube and primary peritoneal carcinomas: a Gynecologic Oncology Group study. Gynecol Oncol 2013;129(1):86–91 doi 10.1016/j.ygyno.2013.01.006. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 60.Zhou Y, Bian B, Yuan X, Xie G, Ma Y, Shen L. Prognostic Value of Circulating Tumor Cells in Ovarian Cancer: A Meta-Analysis. PLoS One 2015;10(6):e0130873 doi 10.1371/journal.pone.0130873. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 61.Leon SA, Shapiro B, Sklaroff DM, Yaros MJ. Free DNA in the serum of cancer patients and the effect of therapy. Cancer Res 1977;37(3):646–50. [PubMed] [Google Scholar]
- 62.Schwarzenbach H, Hoon DS, Pantel K. Cell-free nucleic acids as biomarkers in cancer patients. Nat Rev Cancer 2011;11(6):426–37 doi 10.1038/nrc3066. [DOI] [PubMed] [Google Scholar]
- 63.Diaz LA Jr., Bardelli A Liquid biopsies: genotyping circulating tumor DNA. J Clin Oncol 2014;32(6):579–86 doi 10.1200/JCO.2012.45.2011. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 64.Diehl F, Li M, Dressman D, He Y, Shen D, Szabo S, et al. Detection and quantification of mutations in the plasma of patients with colorectal tumors. Proc Natl Acad Sci U S A 2005;102(45):16368–73 doi 10.1073/pnas.0507904102. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 65.Forshew T, Murtaza M, Parkinson C, Gale D, Tsui DW, Kaper F, et al. Noninvasive identification and monitoring of cancer mutations by targeted deep sequencing of plasma DNA. Sci Transl Med 2012;4(136):136ra68 doi 10.1126/scitranslmed.3003726. [DOI] [PubMed] [Google Scholar]
- 66.Giannopoulou L, Kasimir-Bauer S, Lianidou ES. Liquid biopsy in ovarian cancer: recent advances on circulating tumor cells and circulating tumor DNA. Clin Chem Lab Med 2018;56(2):186–97 doi 10.1515/cclm-2017-0019. [DOI] [PubMed] [Google Scholar]
- 67.Lo YM, Zhang J, Leung TN, Lau TK, Chang AM, Hjelm NM. Rapid clearance of fetal DNA from maternal plasma. Am J Hum Genet 1999;64(1):218–24 doi 10.1086/302205. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 68.Yao W, Mei C, Nan X, Hui L. Evaluation and comparison of in vitro degradation kinetics of DNA in serum, urine and saliva: A qualitative study. Gene 2016;590(1):142–8 doi 10.1016/j.gene.2016.06.033. [DOI] [PubMed] [Google Scholar]
- 69.To EW, Chan KC, Leung SF, Chan LY, To KF, Chan AT, et al. Rapid clearance of plasma Epstein-Barr virus DNA after surgical treatment of nasopharyngeal carcinoma. Clin Cancer Res 2003;9(9):3254–9. [PubMed] [Google Scholar]
- 70.Elazezy M, Joosse SA. Techniques of using circulating tumor DNA as a liquid biopsy component in cancer management. Comput Struct Biotechnol J 2018;16:370–8 doi 10.1016/j.csbj.2018.10.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 71.Parkinson CA, Gale D, Piskorz AM, Biggs H, Hodgkin C, Addley H, et al. Exploratory Analysis of TP53 Mutations in Circulating Tumour DNA as Biomarkers of Treatment Response for Patients with Relapsed High-Grade Serous Ovarian Carcinoma: A Retrospective Study. PLoS Med 2016;13(12):e1002198 doi 10.1371/journal.pmed.1002198. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 72.Brown PO, Palmer C. The preclinical natural history of serous ovarian cancer: defining the target for early detection. PLoS Med 2009;6(7):e1000114 doi 10.1371/journal.pmed.1000114. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 73.Lutz AM, Willmann JK, Cochran FV, Ray P, Gambhir SS. Cancer screening: a mathematical model relating secreted blood biomarker levels to tumor sizes. PLoS Med 2008;5(8):e170 doi 10.1371/journal.pmed.0050170. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 74.Warton K, Samimi G. Methylation of cell-free circulating DNA in the diagnosis of cancer. Front Mol Biosci 2015;2:13 doi 10.3389/fmolb.2015.00013. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 75.Liggett TE, Melnikov A, Yi Q, Replogle C, Hu W, Rotmensch J, et al. Distinctive DNA methylation patterns of cell-free plasma DNA in women with malignant ovarian tumors. Gynecol Oncol 2011;120(1):113–20 doi 10.1016/j.ygyno.2010.09.019. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 76.Widschwendter M, Zikan M, Wahl B, Lempiainen H, Paprotka T, Evans I, et al. The potential of circulating tumor DNA methylation analysis for the early detection and management of ovarian cancer. Genome Med 2017;9(1):116 doi 10.1186/s13073-017-0500-7. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 77.Wang BG, Huang HY, Chen YC, Bristow RE, Kassauei K, Cheng CC, et al. Increased plasma DNA integrity in cancer patients. Cancer Res 2003;63(14):3966–8. [PubMed] [Google Scholar]
- 78.Yanez-Mo M, Siljander PR, Andreu Z, Zavec AB, Borras FE, Buzas EI, et al. Biological properties of extracellular vesicles and their physiological functions. J Extracell Vesicles 2015;4:27066 doi 10.3402/jev.v4.27066. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 79.Colombo M, Raposo G, Thery C. Biogenesis, secretion, and intercellular interactions of exosomes and other extracellular vesicles. Annu Rev Cell Dev Biol 2014;30:255–89 doi 10.1146/annurev-cellbio-101512-122326. [DOI] [PubMed] [Google Scholar]
- 80.Zijlstra A, Di Vizio D. Size matters in nanoscale communication. Nat Cell Biol 2018;20(3):228–30 doi 10.1038/s41556-018-0049-8. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 81.Tkach M, Thery C. Communication by Extracellular Vesicles: Where We Are and Where We Need to Go. Cell 2016;164(6):1226–32 doi 10.1016/j.cell.2016.01.043. [DOI] [PubMed] [Google Scholar]
- 82.Atay S, Banskota S, Crow J, Sethi G, Rink L, Godwin AK. Oncogenic KIT-containing exosomes increase gastrointestinal stromal tumor cell invasion. Proc Natl Acad Sci U S A 2014;111(2):711–6 doi 10.1073/pnas.1310501111. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 83.Fu Q, Zhang Q, Lou Y, Yang J, Nie G, Chen Q, et al. Primary tumor-derived exosomes facilitate metastasis by regulating adhesion of circulating tumor cells via SMAD3 in liver cancer. Oncogene 2018;37(47):6105–18 doi 10.1038/s41388-018-0391-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 84.Hoshino A, Costa-Silva B, Shen TL, Rodrigues G, Hashimoto A, Tesic Mark M, et al. Tumour exosome integrins determine organotropic metastasis. Nature 2015;527(7578):329–35 doi 10.1038/nature15756. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 85.Peinado H, Aleckovic M, Lavotshkin S, Matei I, Costa-Silva B, Moreno-Bueno G, et al. Melanoma exosomes educate bone marrow progenitor cells toward a pro-metastatic phenotype through MET. Nat Med 2012;18(6):883–91 doi 10.1038/nm.2753. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 86.Crow J, Atay S, Banskota S, Artale B, Schmitt S, Godwin AK. Exosomes as mediators of platinum resistance in ovarian cancer. Oncotarget 2017;8(7):11917–36 doi 10.18632/oncotarget.14440. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 87.Nakamura K, Sawada K, Kinose Y, Yoshimura A, Toda A, Nakatsuka E, et al. Exosomes Promote Ovarian Cancer Cell Invasion through Transfer of CD44 to Peritoneal Mesothelial Cells. Mol Cancer Res 2017;15(1):78–92 doi 10.1158/1541-7786.MCR-16-0191. [DOI] [PubMed] [Google Scholar]
- 88.Kobayashi M, Salomon C, Tapia J, Illanes SE, Mitchell MD, Rice GE. Ovarian cancer cell invasiveness is associated with discordant exosomal sequestration of Let-7 miRNA and miR-200. J Transl Med 2014;12:4 doi 10.1186/1479-5876-12-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 89.Kanlikilicer P, Bayraktar R, Denizli M, Rashed MH, Ivan C, Aslan B, et al. Exosomal miRNA confers chemo resistance via targeting Cav1/p-gp/M2-type macrophage axis in ovarian cancer. EBioMedicine 2018;38:100–12 doi 10.1016/j.ebiom.2018.11.004. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 90.Pink RC, Samuel P, Massa D, Caley DP, Brooks SA, Carter DR. The passenger strand, miR-21–3p, plays a role in mediating cisplatin resistance in ovarian cancer cells. Gynecol Oncol 2015;137(1):143–51 doi 10.1016/j.ygyno.2014.12.042. [DOI] [PubMed] [Google Scholar]
- 91.Weiner-Gorzel K, Dempsey E, Milewska M, McGoldrick A, Toh V, Walsh A, et al. Overexpression of the microRNA miR-433 promotes resistance to paclitaxel through the induction of cellular senescence in ovarian cancer cells. Cancer Med 2015;4(5):745–58 doi 10.1002/cam4.409. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 92.Au Yeung CL, Co NN, Tsuruga T, Yeung TL, Kwan SY, Leung CS, et al. Exosomal transfer of stroma-derived miR21 confers paclitaxel resistance in ovarian cancer cells through targeting APAF1. Nat Commun 2016;7:11150 doi 10.1038/ncomms11150. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 93.Cho JA, Park H, Lim EH, Kim KH, Choi JS, Lee JH, et al. Exosomes from ovarian cancer cells induce adipose tissue-derived mesenchymal stem cells to acquire the physical and functional characteristics of tumor-supporting myofibroblasts. Gynecol Oncol 2011;123(2):379–86 doi 10.1016/j.ygyno.2011.08.005. [DOI] [PubMed] [Google Scholar]
- 94.Ying X, Wu Q, Wu X, Zhu Q, Wang X, Jiang L, et al. Epithelial ovarian cancer-secreted exosomal miR-222–3p induces polarization of tumor-associated macrophages. Oncotarget 2016;7(28):43076–87 doi 10.18632/oncotarget.9246. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 95.Im H, Shao H, Park YI, Peterson VM, Castro CM, Weissleder R, et al. Label-free detection and molecular profiling of exosomes with a nano-plasmonic sensor. Nat Biotechnol 2014;32(5):490–5 doi 10.1038/nbt.2886. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 96.Runz S, Keller S, Rupp C, Stoeck A, Issa Y, Koensgen D, et al. Malignant ascites-derived exosomes of ovarian carcinoma patients contain CD24 and EpCAM. Gynecologic Oncology 2007;107(3):563–71 doi 10.1016/j.ygyno.2007.08.064. [DOI] [PubMed] [Google Scholar]
- 97.He M, Crow J, Roth M, Zeng Y, Godwin AK. Integrated immunoisolation and protein analysis of circulating exosomes using microfluidic technology. Lab Chip 2014;14(19):3773–80 doi 10.1039/c4lc00662c. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 98.Zhao Z, Yang Y, Zeng Y, He M. A microfluidic ExoSearch chip for multiplexed exosome detection towards blood-based ovarian cancer diagnosis. Lab Chip 2016;16(3):489–96 doi 10.1039/c5lc01117e. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 99.Zhang P, Zhou X, He M, Shang Y, Tetlow AL, Godwin AK. Ultrasensitive detection of circulating exosomes with a 3D-nanopatterned microfluidic chip. Nature Biomedical Engineering 2019. doi 10.1038/s41551-019-0356-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 100.Heitzer E, Haque IS, Roberts CES, Speicher MR. Current and future perspectives of liquid biopsies in genomics-driven oncology. Nat Rev Genet 2019;20(2):71–88 doi 10.1038/s41576-018-0071-5. [DOI] [PubMed] [Google Scholar]
- 101.Ramalingam N, Jeffrey SS. Future of Liquid Biopsies With Growing Technological and Bioinformatics Studies: Opportunities and Challenges in Discovering Tumor Heterogeneity With Single-Cell Level Analysis. Cancer J 2018;24(2):104–8 doi 10.1097/PPO.0000000000000308. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 102.Zhang P, Zhou X, He M, Shang Y, Tetlow AL, Godwin AK, et al. Ultrasensitive detection of circulating exosomes with a 3D-nanopatterned microfluidic chip. Nature Biomedical Engineering 2019. doi 10.1038/s41551-019-0356-9. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 103.Butler TM, Spellman PT, Gray J. Circulating-tumor DNA as an early detection and diagnostic tool. Curr Opin Genet Dev 2017;42:14–21 doi 10.1016/j.gde.2016.12.003. [DOI] [PubMed] [Google Scholar]





