Table 1. Primers and probes used in this study.
Application | Species | Oligonucleotide sequence | Target, size (bp) |
---|---|---|---|
TaqMan | Bison priscus | F, CCCCAGCAAATCCACTCAATACA | CYTB, 81 |
R, TTGATCGTAAAATTGCGTATGCAAATAAG | |||
Probe, CCTCCCCACATCAAAC | |||
TaqMan | Bison schoetensacki | F, CTACTAGTACTATTCGCACCCGA | CYTB, 75 |
R, AGGCGTGTTAAGTGGATTTGCT | |||
Probe, CCTCCTCGGAGACCCAG | |||
TaqMan | Bos primigenius | F, CCAGCCAATCCACTCAACACA | CYTB, 79 |
R, TTGATCGTAAGATTGCGTATGCAAA | |||
Probe, CCCCTCACATCAAACC | |||
TaqMan | Rangifer tarandus | F, TCACATCTGTCGAGACGTCAATT | CYTB, 61 |
R, TGCTCCGTTGGCATGTATGTA | |||
Probe, TGGCTGAATCATCCG | |||
TaqMan | Cervus elaphus | F, CATGTAGGGCGAGGCCTGTA | CYTB, 66 |
R, AACTACTCCGATGTTTCACGTCTCT | |||
Probe, ACGGATCATATACTTTTC | |||
TaqMan | Crocuta crocuta | F, TGGCGAGACATTATCCGAGAA | COX3, 68 |
R, CGCAGCCCCTTTTGTACAGT | |||
Probe, CACATTCCAGGGACACC | |||
PCR-sequencing | Bison priscus | F, CCAAACCCTTAAACTATCCCTC | ND5, 74 |
R, CGAATAGTGCTACTGGGACA | |||
PCR-sequencing | Bison schoetensacki | F, CTACTAGTACTATTCGCACCCGA | CYTB, 75 |
R, AGGCGTGTTAAGTGGATTTGCT | |||
PCR-sequencing | Rangifer tarandus | F, ATCCGATACAATAACAGCAT | CYTB, 65 |
R, TTCAGCCATAATTGACGTCT |
Oligonucleotides sequences are displayed in the 5’-3’ orientation. F, forward PCR primer; R, reverse PCR primer; Probe, TaqMan minor groove binder (MGB) probe labeled with 6-carboxyfluorescein (FAM). The last column indicates the region of the mitochondrial genome amplified with each primer set and the size of the amplicon.