TABLE 1:
Primer sequences used to amplify putative enhancers from zebrafish genomic DNA.
Primer | Sequencea |
---|---|
Tcf3a-enh1F1 | ATGCCTCGAGTACTGCGTTAATCGCGCGTT |
Tcf3a-enh1R1 | ATGCCTCGAGGTTAGTGTGATATAATCTGT |
Tle3a-enh1F1 | ATGCCTCGAGGAAAAAAATAGATGACATTAC |
Tle3a-enh1R1 | ATGCCTCGAGGCTAGCGCTGGGAATACGA |
Dachb-enh1F1 | ATGCCTCGAGCGGTTTCTTTGCCATTCTTT |
Dachb-enh1R1 | ATGCCTCGAGAACTAAGAACAATGTACG |
Fgf8a-XhoIenhF1 | ATGCCTCGAGGGAGGTCGTTTGCGTATTTG |
Fgf8a-XhoIenhR1 | ATGCCTCGAGCTTGTCAATCCACCCTGCTT |
Yap1-enhF1 | |
Yap1-enhR1 | |
Pax5-enh1F1 | ATGCCTCGAGGCAAACGGATATTTTAAAAT |
Pax5-enh1R1 | ATGCCTCGAGGTGCGTAAAAATCCAAGTAA |
Her6-enh1F1 | ATGCCTCGAGTTCTTTTATAATTGTACTG |
Her6-enh1R1 | ATGCCTCGAGTGATGTAAATAGAAATACTG |
Prdm14-XhoIenhF1 | ATGCCTCGAGCCCCTCTTCTTTGTCCCTTG |
Prdm14-XhoIenhR1 | ATGCCTCGAGGGTAGGCTATCTGGACGGATAAT |
Each primer contains an XhoI site (CTCGAG) to allow it to be cloned into the E1b-GFP-Tol2 vector with the exception of yap1, which contained BglII sites (AGATCT).