Figure 4.
Schematic representation of selected altered transcripts in the mucosae of segments of the internal genital tract of the sows in P1-AI group; Endocervix (EndoCvx: (A)), Endometrium (DisEndom: (B), ProEndom: (C)), Utero-tubal Junction (UTJ: (D)), Isthmus (Isth: (E)), Ampulla (Amp: (F)) and Infundibulum (Inf: (G)). The analysis of overrepresented functional categories was performed using the Cytoscape v3.0.0 application ClueGo v2.0.3. Terms are functionally grouped based on shared genes (kappa score) and are shown in different colors. The size of the nodes indicates the degree of significance, where the biggest nodes correspond to highest significance. The following ClueGo parameters were used: GO tree levels 3–6 (first level = 0); minimum number of genes 1; minimum percentage of genes 8, 5P-value correction, Benjamini-Hochberg, terms with P < 0.05, GO term connection restriction (kappa score) 0.4; GO term grouping, GO term fusion; initial group size of 3. The resulting network was modified; that is, some redundant and non-informative terms were deleted and the network manually rearranged.