Skip to main content
. 2020 Jan 24;14:15. doi: 10.3389/fnins.2020.00015

TABLE 3.

First cross-cohort evaluation.

Region of interest Segmentation method Dice score Precision Recall Hausdorff distance (in voxels)
Left hippocampus MRI U-Net 79.09 ± 2.63% 74.72 ± 4.27% 84.23 ± 3.15% 3.44 ± 0.74
Cropped MRI U-Net 84.44 ± 2.32% 78.47 ± 4.17% 91.60 ± 2.47% 3.19 ± 0.64
Shape MRI U-Net 84.92 ± 2.56% 79.46 ± 5.03% 91.57 ± 3.60% 3.16 ± 0.77
Tissue MRI U-Net 84.32 ± 2.16% 79.04 ± 4.12% 90.59 ± 2.90% 3.33 ± 0.85
Autocontext MRI U-Net 80.55 ± 2.61% 73.99 ± 4.23% 88.67 ± 3.50% 3.33 ± 0.72
FreeSurfer 6.0 79.41 ± 3.77% 78.89 ± 5.46% 80.20 ± 4.39% 4.24 ± 1.25
Right hippocampus MRI U-Net 80.15 ± 2.25% 74.54 ± 3.12% 86.80 ± 3.08% 3.92 ± 1.14
Cropped MRI U-Net 82.85 ± 2.52% 75.97 ± 3.91% 91.27 ± 2.31% 3.80 ± 1.05
Shape MRI U-Net 84.19 ± 2.50% 77.94 ± 4.49% 91.83 ± 3.28% 3.62 ± 1.04
Tissue MRI U-Net 82.88 ± 2.35% 76.86 ± 3.60% 90.08 ± 2.71% 3.68 ± 1.11
Autocontext MRI U-Net 80.51 ± 2.20% 73.08 ± 3.27% 89.79 ± 3.03% 3.88 ± 1.16
FreeSurfer 6.0 79.57 ± 3.54% 77.71 ± 5.53% 81.78 ± 3.40% 4.61 ± 1.11

The performance of the proposed methods (in terms of Dice score, precision, recall, and Hausdorff distance) was tested on a new unseen dataset from a different cohort (i.e., AddNeuroMed cohort) than the one used for training. The performance is reported also for the segmentations obtained using FreeSurfer 6.0 on the same data. All evaluation metrics are expressed as mean ± standard deviation.