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. 2020 Mar 9;16(3):e1008651. doi: 10.1371/journal.pgen.1008651

Table 1. Case-specific coding variants found in whole exome sequencing data in the associated locus.

Gene Protein Genomic coordinates Coding sequence
variant
Amino acid consequence Predicted effect
LAMP3 lysosomal-associated membrane protein 3 chr34:16092728C>T c.1159G>A
XM_843796.4
p.(E387K)
XP_848889.2
Deleterious
ABCC5 ATP-binding cassette subfamily A member 5 chr34:16887330G>A
c.2524C>T
NM_001128100.1
p.(P842S)
NP_001121572.1
Neutral
KLHL6 kelch-like family member 6 chr34:16447091G>A c.1713C>T
XM_545220.6
p.(I571I) XP_545220.3 No effect