Table 1.
Enriched functional annotation in each of the seven clusters of DEGs.
| Cluster No. | Functional annotation | q-value |
|---|---|---|
| 1 | Cell wall | 8.99E-03 |
| 1 | Lipid metabolism | 2.32E-03 |
| 1 | Nutrient uptake | 4.32E-03 |
| 1 | Protein modification | 7.84E-08 |
| 1 | Solute transport | 1.78E-04 |
| 2 | Protein degradation | 1.37E-05 |
| 2 | RNA biosynthesis | 3.25E-08 |
| 2 | Solute transport | 7.86E-03 |
| 3 | Amino acid metabolism | 1.53E-05 |
| 3 | Cell cycle | 1.09E-27 |
| 3 | DNA damage response | 2.46E-04 |
| 3 | Environmental stimuli response | 1.11E-03 |
| 3 | Nucleotide metabolism | 1.57E-04 |
| 3 | Photosynthesis | 4.17E-10 |
| 3 | Protein biosynthesis | 8.41E-73 |
| 3 | Protein translocation | 8.24E-21 |
| 3 | RNA processing | 6.78E-36 |
| 4 | Carbohydrate metabolism | 3.86E-03 |
| 4 | Coenzyme metabolism | 8.47E-05 |
| 4 | Photosynthesis | 1.18E-32 |
| 4 | Secondary metabolism | 3.85E-03 |
| 5 | Cell wall | 4.56E-12 |
| 5 | Phytohormones | 3.73E-03 |
| 5 | Protein modification | 3.48E-06 |
| 5 | Secondary metabolism | 5.05E-04 |
| 6 | Phytohormones | 3.22E-04 |
| 6 | Polyamine metabolism | 3.22E-04 |
| 6 | RNA biosynthesis | 1.82E-09 |
| 7 | Cell wall | 4.45E-06 |
| 7 | Cellular respiration | 3.53E-25 |
| 7 | Cytoskeleton | 1.76E-04 |
| 7 | Lipid metabolism | 2.21E-09 |
| 7 | Membrane vesicle trafficking | 2.18E-07 |
| 7 | Protein biosynthesis | 1.48E-18 |
Significance was determined by the hypergeometric distribution (p-value < 0.01) and Benjamini-Hochberg procedure (q-value < 0.01).