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. 2020 Jan 31;20:323–330. doi: 10.1016/j.omtn.2020.01.029

Table 3.

List of the AUC Scores Obtained by Various Methods on the On-Target Dataset Reported in Chuai et al.46

Cell Typea Methods AUC (%)
hct116 Azimuthb 74.1
DeepCRISPR (pt+aug CNN)c 87.4
sgRNA-PSMd 91.7
Retrained sgRNA-PSMe 74.0
Hela Azimuthb 67.5
DeepCRISPR (pt+aug CNN)c 78.2
sgRNA-PSMd 82.8
Retrained sgRNA-PSMe 72.1
hl60 Azimuthb 79.2
DeepCRISPR (pt+aug CNN)c 73.9
sgRNA-PSMd 77.6
Retrained sgRNA-PSMe 83.7
a

The cell type of the independent test dataset.

b

Results reported in Chuai et al.46

c

Results reported in Chuai et al.46

d

The sgRNA-PSM predictor trained with the dataset reported in Chuai et al.;46 see Equations 9 and 10 with k = 4, m = 2,  = 9, R = 0.05, F = 2,300.

e

The sgRNA-PSM predictor trained with each of the three datasets (hct116, hela, and hl60).