Table 1.
Primers | Primer Sequences | Amplicon Size |
---|---|---|
GAPDH Primers | ||
GAPDH1 | 5′AACGGATTTGGTCGTATTGGGC3′ | 600 bps |
GAPDH2 | 5′AGGGATGATGTTCTGGAGAGCC3′ | |
GAPDH2 | 5′AGGGATGATGTTCTGGAGAGCC3′ | 644 bps |
GAPDH3 | 5′AAGCTGACTCAGCCCGCAAAGG3′ | |
PKM Primers | ||
PKM1 F | 5′TCCACAGACCTCATGGAAGC3′ | 157 bps |
PKM1 R | 5′GATTCCGGGTCACAGCAATG3′ | |
PKM2 F | 5′GAGGCCTCCTTCAAGTGCTG3′ | 231 bps |
PKM2 R | 5′CATGGCAAAGTTCACCCGGA3′ | |
PKM(C) F | 5′TCAGATGCTGGAGAGCATGAT3′* | 442 bps |
PKM(C) R | 5′CTTGCACAGCACAGGGAAGATGCC3′ | |
PHGDH Primers | ||
PHGDHSYF | 5′AAAGAGGAGCTGATAGCGGA3′ | |
PHGDHSYR | 5′ACCACCTGGAGTTTCTCAGC3′ | 107 bps |
SHMT2 Primers | ||
SHMT2/SYF | 5′CCAGGTCAGGGCTCATCTTC3′ | 169 bps |
SHMT2/SYR | 5′TGCTTTAGGGCCACAGCTAC3′ | |
Housekeeping Genes (SYBR Green) | ||
HMBSF | 5′GGCAACTGTACCTGACTGGA3′ | 110 bps |
HMBSR | 5′CTCAGGGCCATCTTCATGCT3′ | |
B-actinF | 5′GAGCACAGAGCCTCGCCTT3′ | 196 bps |
B-actinR | 5′CCCACCATCACGCCCTGG3′ | |
PPIAF | 5′GACTGAGTGGTTGGATGGCA3′ | 77 bps |
PPIAR | 5′GCTCCATGGCCTCCACAATA3′ |
* underlined: 3′exon 7; italic: 5′ exon 8