Table 1.
Related information of peptides used in this study.
| Peptide Names | Peptide Position of the VirB2 Protein | Peptide Sequences | Length (a. a.) |
pI | Hydrophobicity | Mw (Da) |
References |
|---|---|---|---|---|---|---|---|
| VirB2-S111-T58 | C-terminus connected with N-terminus | S111thFLGKTLTGGGQSAGGGTDPAT58th | 22 | 5.55 | 27.3 % | 1980.12 | This study |
| VirB2-I63-I80 | Transmembrane domain (TM) 1 | I63thCTFILGPFGQSLAVLGI80th | 18 | 5.52 | 61.1 % | 1849.26 | This study |
| VirB2-I80-V101 | Part of TM1, region between 2 TM domains, part of TM2 | I80thVAIGISWMFGRASLGLVAGVV101th | 22 | 9.75 | 68.2 % | 2216.71 | This study |
| VirB2-G95-F112 | Transmembrane domain (TM) 2 | G95thLVAGVVGGIVIMFGASF112th | 18 | 5.52 | 66.7 % | 1694.06 | This study |
| VirB2-I104-G121 | C-terminal region | I104thVIMFGASFLGKTLTGGG121th | 18 | 8.75 | 50.0 % | 1769.13 | This study |
| Elf18 | N-terminal region | M1stSKEKFERTKPHVNVGTI18th | 18 | 9.70 | 33.3 % | 2101.45 | [51] |
| Agro-Flg22 | N-terminal region | S19thRVSSGLRVKSASDNAAYWSIA40th | 22 | 9.98 | 36.4 % | 2325.57 | [24] |
Red letters represent hydrophobic uncharged residues. The order of amino acid in the VirB2 peptide was based on Wu et al. 2014 [52]. pI value and molecule weight (Mw) of each peptide were obtained using the Compute pI/Mw program [53]. Hydrophobicity value of each peptide was calculated using the PEPTIDE 2.0 program [54].