Table 1.
Comparison of Predicted Active ERK Contents Obtained Using the Sensor Array with the Calibration Regression Model, Western Blot, and Immunoprecipitation–Kinase Assay Protocolsa
pp-ERK (ng μg−1 Lysate) | ||||||||
---|---|---|---|---|---|---|---|---|
sensorsb | Western blot | kinase assay | ||||||
cells | treatment | mean (n = 4) | ±SD | mean (n = 2) | ±SD | p-value (two-tailed)c p ≤ 0.05 | value (n = 1) | ±SEd |
MDA-MB-231 | M-n | 0.374 | 0.029 | 0.450 | 0.125 | 0.264 | 0.352 | 0.107 |
M-U | 0.027 | 0.005 | 0.035 | 0.011 | 0.248 | 0.034 | 0.017 | |
M-E | 0.898 | 0.031 | 0.656 | 0.071 | 0.003 | 0.643 | 0.103 | |
M-E/U | 0.007 | 0.016 | 0.062 | 0.037 | 0.051 | 0.010 | 0.017 | |
M-J | 0.067 | 0.013 | 0.110 | 0.055 | 0.168 | 0.073 | 0.012 | |
M-A | 0.351 | 0.032 | 0.407 | 0.008 | 0.082 | 0.383 | 0.086 | |
M-A/J | 0.412 | 0.014 | 0.402 | 0.005 | 0.422 | 0.421 | 0.057 | |
A549 | A-n | 0.175 | 0.002 | 0.243 | 0.082 | 0.128 | 0.161 | 0.016 |
A-U | 0.155 | 0.004 | 0.202 | 0.041 | 0.059 | 0.141 | 0.051 | |
A-E | 0.508 | 0.011 | 0.504 | 0.102 | 0.933 | 0.480 | 0.135 | |
A-E/U | 0.211 | 0.009 | 0.302 | 0.086 | 0.074 | 0.236 | 0.225 | |
A-J | 0.149 | 0.005 | 0.053 | 0.094 | 0.079 | 0.162 | 0.113 | |
A-A | 0.495 | 0.011 | 0.244 | 0.087 | 0.003 | 0.504 | 0.431 | |
A-A/J | 0.32 | 0.005 | 0.213 | 0.106 | 0.081 | 0.338 | 0.059 |
Recombinant ERK1 calibration curves were employed to generate the data in this table. Non-treated cells in serum-free media (n), inhibition of ERK phosphorylation with U0126 (U), induction of ERK phosphorylation with EGF (E), cells treated with U0126 then induced with EGF (E/U), inhibition of JNK pathway with JNK-IN-8 (J), induction of JNK phosphorylation with anisomycin (A), and cells treated with JNK-IN-8 then induced with anisomycin (A/J).
Cell lysates were used at a concentration of 7 μg/well.
Unpaired t-test and p-value calculations for the sensors and the Western blot means were done using GraphPad Prism 7 software.
Standard error of regression slope.