Fig. 2.

Comparisons of genome and amino acid sequences of six bat JEV isolates (GD1, HN2, B58, GB30, HB49 and HB97) with the Nakayama (Nak) reference sequence. Single vertical black lines in the first line for each viral isolate indicate single nucleotide differences. Single vertical black lines in the second line for each viral isolate indicate single amino acid differences. Wider black boxes indicate larger regions of sequence differences, including areas of absent sequence. Dashes indicate gaps in sequence alignments