Table 1.
Comparison of nucleotide sequences (% nucleotide sequence identity) of the S (left part, labeled with blue color) and ORF3 (right part, labeled with red color) genes of the JS201603 isolate with other strains
| Strain | Genbank Accession no |
Country | Identity (S) |
Strain | Genbank Accession no |
Country | Identity (ORF3) |
|---|---|---|---|---|---|---|---|
| MN | KF468752 | USA | 98.9% | IL20697 | KT860508.1 | USA | 96.0% |
| PC21A | KR078299.1 | USA | 99.0% | Ohio60 | KJ645657.1 | USA | 96.1% |
| Ohio60 | KJ645657.1 | USA | 99.0% | OH1414 | KJ408801 | USA | 96.1% |
| K14JB | KJ623926 | Korea | 98.9% | OH851 | KJ399978.1 | USA | 96.1% |
| KNU1305 | KJ662670 | Korea | 98.9% | MO2014 | KM975741.1 | USA | 96.1% |
| OH1414 | KJ408801 | USA | 98.9% | MN | KF468752 | USA | 96.1% |
| IA1 | KF468753 | USA | 99.0% | K14JB01 | KJ623926 | Korea | 96.1% |
| ZMDZY | KC196276 | China | 98.7% | ISU13 | KF650373.1 | USA | 96.1% |
| LZW | KJ777678.1 | China | 98.9% | IA1 | KF468753 | USA | 96.1% |
| YM2013 | KJ196348.1 | China | 98.6% | IA2013 | KM975738.1 | USA | 96.1% |
| BJ2011 | JN825712.1 | China | 99% | GER2014 | LM645057.1 | Germany | 96% |
| GDB | JX088695 | China | 98.8% | PC21A | KR078299.1 | USA | 96.1% |
| XY2013 | KR818832.1 | China | 98.6% | LZW | KJ777678.1 | China | 96.3% |
| SD01 | KU380331.1 | China | 98.0% | ZMDZY | KC196276 | China | 96% |
| FJZZ | KC140102.1 | China | 98.1% | BJ2011 | JN825712.1 | China | 96% |
| YNKM | KF761675.1 | China | 98.6% | KNU1305 | KJ662670 | Korea | 96% |
| AJ1102 | JX188454.1 | China | 98.0% | GDB | JX088695 | China | 96.4% |
| LC | JX489155 | China | 98.1% | YM2013 | KJ196348.1 | China | 96% |
| YN15 | KT021228.1 | China | 98.0% | XY2013 | KR818832.1 | China | 96.3% |
| YN90 | KT021231.1 | China | 97.8% | FJND3 | JQ282909 | China | 96.3% |
| FJND | JQ282909 | China | 97.7% | SD01 | KU380331.1 | China | 96.4% |
| MO2014 | KM975741.1 | USA | 96.1% | CHS | JN547228.1 | China | 96.3% |
| OH851 | KJ399978.1 | USA | 96.3% | FJZZ | KC140102.1 | China | 96.9% |
| IA2013 | KM975738.1 | USA | 96.3% | AJ1102 | JX188454.1 | China | 98.7% |
| IL20697 | KT860508.1 | USA | 96.2% | LC | JX489155 | China | 98.7% |
| GER2014 | LM645057.1 | Germany | 96.4% | YN15 | KT021228.1 | China | 98.7% |
| CV777 | AF353511.1 | Switzerland | 94.2% | YN90 | KT021231.1 | China | 98.7% |
| LZC | EF185992.1 | China | 93.7% | YNKM | KF761675.1 | China | 98.7% |
| SM98 | GU937797 | Korea | 93.9% | SQ2014 | KP728470.1 | China | 96.8% |
| CHS | JN547228.1 | China | 94.1% | ZY2013 | KM890293.1 | China | 96.5% |
| JS2008 | KC210146.1 | China | 94.4% | JS2008 | KC210146.1 | China | 96.5% |
| DR13 | JQ023162.1 | Korea | 94.2% | YY2013 | KM890290.1 | China | 96.3% |
| AH-M | KJ158152.1 | China | 94.1% | CV777 | AF353511.1 | Switzerland | 96.1% |
| SQ2014 | KP728470.1 | China | 94.1% | LZC | EF185992.1 | China | 94.8% |