Fig. 6.

Phylogenetic analysis and genomic organization of novel circo-like viruses and gemycircularviruses identified in red-crowned cranes. (a) Phylogenetic analysis was performed based on the amino acid sequence of the Rep protein. The sequence alignments included two gemycircularviruses and four novel circo-like viruses identified here, their best BLASTp matches in GenBank based on the Rep proteins, and representative strains of gemycircularviruses and circoviruses. The host or source of the viruses included in the phylogenetic analysis are indicated on the branches. (b and c) The genomic organization of the gemycircularviruses identified in red-crowned cranes. (d, e, f, and g) The genomic organization of GaCV1-4 identified in red-crowned cranes. (h) The stem-loop structures of circo-like viruses identified in red-crowned cranes