Table 2.
Nucleotide and amino acid identity (nt/aa; %) | ||||||||
---|---|---|---|---|---|---|---|---|
QIA- 03342 |
QIA-D79/05 | QIA-Q43/06 | SNU- 9106 |
SNU-10043 | SNU- 8065 |
SNU-11045 | ||
Genome | KM91 | 95 | 95 | 96 | 96 | 95 | 87 | 87 |
YX10 | 88 | 88 | 88 | 88 | 88 | 98 | 98 | |
5′-UTR | KM91 | 99 | 98 | 99 | 99 | 99 | 95 | 94 |
YX10 | 95 | 94 | 95 | 94 | 95 | 99 | 99 | |
1ab | KM91 | 97/97 | 96/97 | 96/97 | 96/97 | 96/97 | 87/91 | 87/91 |
YX10 | 87/91 | 87/91 | 87/91 | 87/91 | 87/91 | 98/99 | 98/99 | |
S1 | KM91 | 85/86 | 85/85 | 90/90 | 92/90 | 91/91 | 85/85 | 85/85 |
YX10 | 96/95 | 95/94 | 91/89 | 88/88 | 88/89 | 98/98 | 98/98 | |
S2 | KM91 | 92/94 | 94/94 | 98/97 | 98/97 | 93/93 | 93/95 | 93/95 |
YX10 | 80/71 | 80/71 | 80/71 | 79/71 | 78/70 | 99/100 | 99/100 | |
3a | KM91 | 63/52 | 63/52 | 63/52 | 63/52 | 62/50 | 72/69 | 72/69 |
YX10 | 74/63 | 74/63 | 74/63 | 75/65 | 76/66 | 100/100 | 100/100 | |
3b | KM91 | 80/72 | 80/72 | 80/72 | 80/72 | 81/74 | 74/67 | 74/67 |
YX10 | 86/85 | 87/85 | 86/85 | 85/83 | 86/84 | 99/99 | 99/99 | |
E | KM91 | 98/100 | 97/98 | 99/100 | 97/96 | 94/95 | 86/85 | 86/85 |
YX10 | 86/85 | 87/85 | 86/85 | 85/83 | 86/84 | 99/99 | 99/99 | |
M | KM91 | 94/96 | 96/98 | 94/95 | 95/96 | 98/100 | 89/93 | 89/93 |
YX10 | 90/94 | 91/94 | 90/93 | 89/92 | 89/94 | 99/99 | 99/99 | |
4b | KM91 | 85/82 | 93/94 | 85/82 | 94/93 | 85/81 | 89/87 | 89/87 |
YX10 | 85/84 | 90/91 | 85/84 | 89/87 | 85/83 | 100/100 | 100/100 | |
4c | KM91 | 88/77 | 87/74 | 8877 | 87/72 | 88/77 | 71/53 | 7153 |
YX10 | 75/58 | 74/53 | 74/58 | 74/58 | 75/58 | 100/100 | 100/100 | |
5a | KM91 | 96/97 | 97/98 | 95/95 | 95/92 | 94/94 | 83/83 | 83/83 |
YX10 | 83/85 | 83/85 | 81/81 | 82/81 | 80/80 | 98/98 | 98/98 | |
5b | KM91 | 97/93 | 99/98 | 98/95 | 98/94 | 99/98 | 91/88 | 91/88 |
YX10 | 93/91 | 92/90 | 92/90 | 92/90 | 93/91 | 93/88 | 92/88 | |
N | KM91 | 97/97 | 97/97 | 97/96 | 97/97 | 97/97 | 89/92 | 89/92 |
YX10 | 88/92 | 88/92 | 88/92 | 88/92 | 88/92 | 88/92 | 88/92 | |
6b | KM91 | 97/96 | 96/93 | 94/92 | 97/95 | 100/100 | 84/78 | 85/77 |
YX10 | 84/81 | 83/78 | 81/77 | 84/80 | 84/78 | 96/95 | 95/93 | |
3′-UTR | KM91 | 98 | 97 | 96 | 95 | 98 | 84 | 85 |
YX10 | 83 | 82 | 80 | 80 | 82 | 95 | 96 |