Table 3.
Prevalence (%) of respiratory viruses sorted by the type of respiratory tract secretions analyzed
| AdV | BoV | CoV | EnV | IfV | MpV | PiV | RV | RSV | |
|---|---|---|---|---|---|---|---|---|---|
| Oro-/naso-pharyngeal aspirates |
3.3 (1.7, 6.3) |
10.9 (6.6, 15.2) |
6.0 (2.4, 15.1) |
15.7 (8.2, 30.0) |
10.5 (6.1, 18.0) |
3.9 (2.0, 7.5) |
6.9 (3.6, 13.3) |
41.5 (28.0, 55.0) |
11.6 (7.3, 18.4) |
| Oro-/naso-pharyngeal swab | 5.4 (1.5,19.5) |
0.0 (0.0, 1.2) |
7.8 (3.6, 16.7) |
5.3 (3.1, 9.0) |
7.0 (2.7, 17.8) |
6.9 (4.5, 10.6) |
5.0 (1.9, 13.4) |
32.7 (25.3, 40.1) |
9.1 (4.4, 18.9) |
| Oro-/naso-pharyngeal lavage/wash |
3.4 (0.2, 52.5) |
- |
30.0 (11.6, 77.3) |
3.4 (0.2, 52.5) |
40.0 (18.7, 85.5) |
20.0 (5.8, 69.1) |
10.0 (1.6, 64.2) |
58.0 (24.8, 91.2) |
21.0 (9.2, 47.8) |
| Oro-/naso-pharyngeal secretion/mucus |
2.3 (0.8, 7.2) |
0.8 (0.0, 2.3) |
0.8 (0.1, 5.5) |
3.9 (1.7, 9.2) |
4.2 (0.2, 80.7) |
3.9 (1.7, 9.2) |
2.2 (0.8, 5.9) |
65.1 (41.6, 88.6) |
28.4 (15.0, 53.6) |
| Induced sputum |
9.4 (4.1, 21.7) |
- | - | - |
13.2 (6.6, 26.3) |
- |
0.9 (0.1, 14.7) |
30.2 (17.8, 42.5) |
0.9 (0.1, 14.7) |
RV, rhinovirus; AdV, adenovirus; BoV, bocavirus; CoV, coronavirus; CV, cytomegalovirus; EnV, enterovirus; HSV, herpes simplex virus; IfV, influenza virus; MpV, metapneumovirus; PiV, parainfluenzavirus (PiV); RSV, respiratory syncytial virus