Table 1.
Nucleotide and putative amino acid sequence identities of MVC (15D009) and other reference MVC strains from several countries*
Gene region | Nucleotide sequence identity (%)/Amino acid sequence identity (%) | |||||||
---|---|---|---|---|---|---|---|---|
MVC (USA) | MVC SH1 (China) | MVC 97-114 (Japan) | MVC 97-047 (Japan) | MVC 08-017 (Japan) | MVC GA3 (USA) | MVC HM-6 (South Korea) | ||
Nonstructural | NS1 | 81.0/86.1 | 88.3/93.5 | 88.2/93.5 | 88.2/93.3 | 88.4/93.5 | 88.0/93.4 | 81.7/86.7 |
NP1 | 91.2/93.0 | 91.4/93.0 | 90.9/93.0 | 91.2/93.0 | 91.2/93.0 | 91.2/93.0 | 99.1/99.4 | |
Structural | VP1/VP2 | 86.3/96.0 | 86.7/96.3 | 86.6/96.4 | 86.6/96.4 | 86.6/95.8 | 86.3/96.1 | 86.8/95.1 |
Coding region | NS1-VP2 | 84.1 | 87.8 | 87.6 | 87.7 | 87.8 | 87.5 | 85.2 |
Bold value indicates amino acid sequence identity
* Reference MVC strains include MVC USA (accession no. NC004442), MVC SH1 (accession no. FJ899734), MVC 97-114 (accession no. AB518884), MVC 97-047 (accession no. AB518883), MVC 08-017 (accession no. AB518882), MVC GA3 (accession no. FJ214110), MVC HM-6 (accession no. AB158475), and MCV 15D009 (accession no. KT241026)