Table 1.
Multiplex Q-PCR primers and probes | Sequence |
hBoV NP-1 gene (88 bp)a | |
Forward primer | 5′-AGAGGCTCGGGCTCATATCA-3′ (2478)c |
Reverse primer | 5′-TCTTCATCACTTGGTCTGAGGTCTT-3′ (2541)c |
Probe | 5′-VIC-AGGAACACCCAATCARCCACCTATCGTCT-TAMRA-3′ (2500)c |
AdV hexon gene (132 bp)b | |
Forward primer | 5′-GCCACGGTGGGGTTTCTAAACTT-3′ (21)e |
Reverse primer | 5′-GCCCCAGTGGTCTTACATGCACATC-3′ (152)e |
Probe | 5′-FAM-TGCACCAGACCCGGGCTCAGGTACTCCGA-TAMRA-3′ (89)e |
Sequencing primers | Sequence |
hBoV NP-1 gene (313 bp)a | |
Forward primer | 5′-CTCCAGCAAGTCCTCCAAAC-3′ (2253)c |
Reverse primer | idem hBoV Q-PCR |
hBoV VP2 gene (965 bp) a | |
Forward primer | 5′-CAGCTGGAGGCAATGCTAC-3′ (4059)d |
Reverse primer | 5′-ATGACGTGGGCTGGATGTAT-3′ (5005)d |
Forward primer semi-nested | 5′-AATTGCAAACCCATCACTCTCA-3′ (4558)d |
Reverse primer semi-nested | 5′-CCCAGACTTGATTTGGAAACATC-3′ (4645)d |
hBoV = human bocavirus; AdV = adenovirus
aDesigned as part of the present study
bHeim et al. [12], adapted according to the sequence information available in GenBank
c, d, eThe location of the primers and probes is indicated in parentheses (the reference sequence is DQ000495(c) and DQ000496(d) for hBoV and AB330083(e) for AdV)