Skip to main content
. 2011 May 4;18(2):501–514. doi: 10.1007/s00894-011-1092-6

Table 2.

Lowest energy structures of the tetramer generated from monomers listed in Table 1. Data represent inter monomer distances, rotational and tilt angles, as well as the interaction energy calculated with MOE. The TMD of each of the monomer facing the pore is listed for each of the tetramers

Method Distance (nm) Angle (°) Tilt (°) Energy (kcal/mol) Pore lining
T-Seq1 2.375 320 9 −4710.7 TMD2
T-Seq2 2..5 180 36 −4724.8 TMD2
T-Sim 2.10 190 24 −4294.2 TMD3
T-Seq1-L 2.025 310 24 −5596.9 TMD2
T-Seq2-L 2.20 150 −36 −6136.7 TMD2
T-Sim-L 2.20 305 21 −5543.0 TMD2