Table 2.
The number of hits for each virus species in the uncultured duck fecal sample collected from Shandong
| Species | Families | Number of hits |
|---|---|---|
| dsRNA viruses | ||
| Human picobirnavirus | Picobirnaviridae | 96 |
| Rotavirus A | Reoviridae | 2 |
| Rotavirus C | Reoviridae | 4 |
| Aquareovirus C | Reoviridae | 4 |
| Avian orthoreovirus | Reoviridae | 105 |
| Retro-transcribing viruses | ||
| Duck hepatitis B virus | Hepadnaviridae | 1 |
| Avian leukosis virus | Retroviridae | 17 |
| Rous sarcoma virus | Retroviridae | 31 |
| Avian retrovirus | Retroviridae | 1 |
| Avian sarcoma virus | Retroviridae | 1 |
| Avian endogenous retrovirus EAV-HP | Retroviridae | 5 |
| Columba palumbus retrovirus | Retroviridae | 1 |
| ssRNA positive-strand viruses | ||
| Avastrovirus 1 | Astroviridae | 7 |
| Avastrovirus 2 | Astroviridae | 64 |
| Turkey avastrovirus 3 | Astroviridae | 1 |
| Mamastrovirus 1 | Astroviridae | 10 |
| Betacoronavirus 1 | Coronaviridae | 26 |
| Severe acute respiratory syndrome-related coronavirus | Coronaviridae | 4 |
| Avian coronavirus | Coronaviridae | 15,464 |
| Circket paralysis virus | Dicistroviridae | 3 |
| Drosophila C virus | Dicistroviridae | 7 |
| Rhopalosiphum padi virus | Dicistroviridae | 4 |
| Foot-and-mouth disease virus | Picornaviridae | 1 |
| Encephalomyocarditis virus | Picornaviridae | 1 |
| Human enterovirus | Picornaviridae | 10 |
| Hepatitis A virus | Picornaviridae | 1 |
| Avian encephalomyelitis virus | Picornaviridae | 141 |
| Soybean mosaic virus | Potyviridae | 11 |
| Watermelon mosaic virus | Potyviridae | 27 |
| Zucchini yellow mosaic virus | Potyviridae | 179 |
| Sindbis virus | Togaviridae | 266 |
| Shallot latnet virus | Betaflexiviridae | 5 |
| Cucumber green mottle mosaic virus | Virgaviridae | 42 |
| Pepper mild mottle virus | Virgaviridae | 84 |
| Tobacco mild green mosaic virus | Virgaviridae | 7 |
| Tobacco mosaic virus | Virgaviridae | 72 |
| Tomato mosaic virus | Virgaviridae | 2 |
| ssRNA negative-strand viruses | ||
| Newcastle disease virus | Paramyxoviridae | 125 |
| Influenza A virus | Orthomyxoviridae | 1090 |
| dsDNA viruses, no RNA stage | ||
| Cercopithecine herpesvirus 5 | Herpesviridae | 1 |
| White spot syndrome virus | Nimaviridae | 1 |
| ssDNA viruses | ||
| Duck circovirus | Circoviridae | 3 |
| Columbid circovirus | Circoviridae | 204 |
| Porcine circovirus | Circoviridae | 2 |
| Diatraea saccharalis densovirus | Parvoviridae | 226 |
| Adeno-associated virus | Parvoviridae | 1 |
| Rat adeno-associated virus 1 | Parvoviridae | 5 |