Table 1.
Distribution of sequence reads to different viruses in 11 nasal swab pools and 3 individual taupapillomavirus positive swab samples
| No. of sample in pool | Total reads | Circoviridae | Paramyxoviridae | Papillomaviridae | Parvoviridae | Coronaviridae | ||
|---|---|---|---|---|---|---|---|---|
| Canine circovirus | Parainfluenza virus 5 | Taupapillomavirus | Chi papillomavirus | Carnivore bocaparvovirus 3 | Betacoronavirus 1 | |||
| Pool1 | 5 | 497,208 | 20 | 29,029 | ||||
| Pool2 | 5 | 1,516,776 | 131 | 2 | ||||
| Pool3 | 5 | 523,486 | 2 | |||||
| Pool4 | 5 | 2,493,284 | ||||||
| Pool5 | 5 | 667,534 | ||||||
| Pool6 | 6 | 606,050 | 8 | |||||
| Pool7 | 7 | 1,125,636 | ||||||
| Pool8 | 7 | 673,820 | ||||||
| Pool9 | 7 | 674,772 | 287 | |||||
| Pool10 | 1 | 1,107,958 | 665 | |||||
| Pool11 | 4 | 930,598 | 4278 | 31 | 11 | |||
| Case 1 (individual sample in Pool1) | 202,354 | 8 | 3084 | |||||
| Case 2 (individual sample in Pool9) | 353,980 | 2424 | ||||||
| Case 3 (individual sample in Pool10) | 399,948 | 1812 | ||||||