Table 6.
SNPs frequencies in association studies of various ethnic groups (healthy individuals). P values calculated by Fischer’s exact test
| SNP | Population | Sample size | Genotype | Frequency | p value (population of column 2 vs. general population of ES) | p value (population of column 2 vs. pomeranian population of ES) | Reference |
|---|---|---|---|---|---|---|---|
| CD209: −336 A/G | Taiwanese | 120 | AA | 111 | <0.0001* | <0.0001* | [43] |
| AG | 9 | <0.0001* | 0.0004* | ||||
| GG | 0 | 0.1 | 0.03* | ||||
| South African | 360 | AA | 137 | <0.0001* | <0.0001* | [19] | |
| AG | 156 | 0.21 | 0.04* | ||||
| GG | 67 | <0.0001* | 0.008* | ||||
| Brazilian (Sao Paulo) | 32 | AA | 18 | 0.68 | 0.37 | [44] | |
| AG | 9 | 0.52 | 1.0 | ||||
| GG | 5 | 0.02* | 0.12 | ||||
| FcγRIIa: −131 H/R | African American | 170 | HH | 44 | 0.38 | 0.6 | [45] |
| HR | 73 | 0.1 | 0.07 | ||||
| RR | 53 | 0.33 | 0.13 | ||||
| Caucasian | 220 | HH | 69 | 0.06 | 0.15 | ||
| HR | 97 | 0.1 | 0.08 | ||||
| RR | 54 | 1.0 | 0.6 | ||||
| Brazilian (Sao Paulo) | 48 | HH | 13 | 0.41 | 0.65 | [22] | |
| HR | 25 | 0.2 | 0.7 | ||||
| RR | 10 | 0.68 | 1.0 | ||||
| TNF-α: −308 A/G | Italian | 138 | GG | 109 | 0.02* | 0.1 | [6] |
| GA | 29 | 0.13 | 0.27 | ||||
| AA | 0 | 0.01* | 0.09 | ||||
| American (USA) | 235 | GG | 164 | 0.44 | 0.75 | [46] | |
| GA | 67 | 0.79 | 1.0 | ||||
| AA | 4 | 0.13 | 0.35 | ||||
| Brazilian (Minas Gerais) | 43 | GG | 29 | 0.85 | 1.0 | [47] | |
| GA | 14 | 0.84 | 0.83 | ||||
| AA | 0 | 0.32 | 0.51 | ||||
| VDR: Taq I | Vietnamese | 247 | TT | 231 | <0.0001* | <0.0001* | [1] |
| TC | 15 | <0.0001* | <0.0001* | ||||
| CC | 1 | <0.0001* | <0.0001* | ||||
| Indian | 143 | TT | 70 | 0.24 | 0.54 | [48] | |
| TC | 62 | 0.89 | 1.0 | ||||
| CC | 11 | 0.13 | 0.42 | ||||
| Brazilian (Rio de Janeiro) | 40 | TT | 29 | 0.001* | 0.007* | [49] | |
| TC | 7 | 0.003* | 0.009* | ||||
| CC | 4 | 0.78 | 1.0 |
* Statistically significant values