Table 2.

Homology (%) between nucleotide/amino acid sequences, and pairwise genetic distances within the partial RdRp gene sequences of strains isolated from eight species, including human

	11D149 (cat)	12D240 (cat)	PC0822 (dog)	KB2 (cattle)	TB3 (sheep)	08KG680 (black goat)	61WA13 (pig)	M-5 (mouse)	TM003K (bat)	A846/88 (human)	FMD (cattle)
11D149	–	0.038	0.206	0.374	0.347	0.363	0.387	0.235	0.581	0.226	2.935
12D240	96.2/98.7	–	0.218	0.367	0.361	0.364	0.394	0.236	0.567	0.215	2.894
PC0822	82.1/92.1	81.2/91.4	–	0.408	0.383	0.409	0.429	0.135	0.588	0.211	3.762
KB2	71.1/72.2	71.5/71.5	69.1/72.2	–	0.079	0.069	0.316	0.380	0.591	0.403	2.359
TB3	72.8/74.8	72.2/74.2	70.6/74.2	92.5/96.7	–	0.084	0.305	0.362	0.606	0.389	2.631
08KG680	71.7/74.2	71.7/73.5	68.9/73.5	93.6/98.0	92.3/97.4	–	0.310	0.368	0.595	0.403	2.627
61WA13	70.9/74.2	70.4/73.5	68.0/72.8	75.9/82.1	76.4/84.1	76.2/82.8	–	0.428	0.556	0.416	3.052
M-5	79.9/89.4	79.9/88.7	87.9/92.7	71.7/73.5	72.2/75.5	71.1/74.8	68.0/76.2	–	0.557	0.223	3.658
TM003 K	59.6/61.6	61.6/60.9	56.5/60.3	60.5/58.3	53.0/59.6	61.1/59.6	63.6/59.6	62.0/60.9	–	0.544	4.369
A846/88	80.4/88.7	81.2/88.7	82.6/87.4	69.8/71.5	70.2/73.5	69.3/72.8	68.2/73.5	81.0/87.4	63.1/61.6	–	2.867
FMD	16.3/27.8	11.0/27.2	16.8/26.5	11.3/27.2	11.3/27.8	12.4/27.8	12.6/26.5	24.1/26.5	19.0/25.8	11.9/27.2	–

11D149 and 12D240 derived from cats; PC0822 derived from dog (JN088541); KB2 derived from cattle (HQ650165); TB3 derived from sheep (GU245693); 08KG680 derived from balck goat (JF714211); 61WA13 derived from pig (JF714214); M-5 derived from mouse (JF755427); TM003 K derived from bat (HM228882); A846/88 derived from human (NC004421) and foot-and-mouth disease (FMD) derived from cattle (X00871). Numbers in italics indicate pairwise genetic distances and numbers in normal/bold font indicate the levels of nucleotide and amino acid sequence homologies (%), respectively