Table 1.
Sequences used in this study
| Strains | GenBank accession no. | Strains | GenBank accession no. |
|---|---|---|---|
| California_99a,b | AY514485.1 | CK/CH/LSD/05Ia | EU637854.1 |
| Arkansas_DPIa,b | GQ504720.1 | ck/CH/LHLJ/140906a | KP036502.1 |
| ck/CH/LJL/111054a,c | KC506155.1 | Connecticut_vaccinea,b | KF696629.1 |
| Delaware_072a,b | GU393332.1 | IBVUkr27-11a | KJ135013.1 |
| Georgia_1998a,b | GQ504722.1 | 4/91_vaccinea,b | KF377577.1 |
| H120a,b,c | FJ888351.1 | YNa,b,c | JF893452.1 |
| ck/CH/LHB/121040a | KJ425495.1 | ck/CH/LDL/97Ia | JX195177.1 |
| H52a,b | EU817497.1 | ck/CH/LHB/100801a | JF330898.1 |
| Peafowl/GD/KQ6/2003a | AY641576.1 | JMKa | GU393338.1 |
| M41a | DQ834384.1 | Holtea,b | GU393336.1 |
| ck/CH/LHLJ/100902a | JF828980.1 | Graya,b | GU393334.1 |
| CK/CH/XDC-_2/2013a | KM213963.1 | BJa | AY319651.1 |
| SDZB0808a | KF853202.1 | CQ04-1a | HM245924.1 |
| Beaudetteb | AJ311317.1 | DY07a | HM245923.1 |
| SDIB821/2012a | KF574761.1 | ITA/90254/2005a | FN430414.1 |
| GX-NN09032a | JX897900.1 | A2a | EU526388.1 |
| YX10a,b,c | JX840411.1 | SAIBKa,b | DQ288927.1 |
| GX-YL9a | HQ850618.1 | Mass41_1985b | FJ904723.1 |
| Sczy3a | JF732903.1 | ck/ZA/3665/11a | KP662631.1 |
| CK/SWE/0658946/10a | JQ088078.1 | Mass41_2006b,c | FJ904713.1 |
| TW2575/98a | DQ646405.2 | HKU11-934d | FJ376619.2 |
| SC021202a | EU714029.1 | HKU13-3514e | NC_011550.1 |
aIBV sequences involved in phylogenetic analysis
bIBV sequences involved in sequence identity analysis
cIBV sequences involved in recombination analysis
dBulbul coronavirus sequence
eMunia coronavirus sequence