Fig. 5.

Phylogenic analysis of topological alternations in the Sczy3 recombinant sequence. (a) Phylogenetic tree of the complete genome sequence. (b) Phylogenetic tree of recombinant fragments (25,892–26,192 nt). Topological changes of recombinant fragments were observed. Phylogenetic trees were drawn by Maximum likelihood method in RDP3.44. Red highlight represents the recombinant sequence, blue highlight represents the minor parental sequence, and green highlight represents the major parental sequence (Color figure online)