Table 1.
Identities of nucleotide and amino acid sequences of CQ5185, PER161, and ISR10
| Gene | Strain | CQ5185 | PER161 | Positiona |
|---|---|---|---|---|
| 5′UTR | PER161 | 92.8 | – | 45–669 |
| VP4 | PER161 | 90.8 (100) | – | 670–876 |
| ISR10 | 95.6 (100) | 92.2 (100) | ||
| VP2 | PER161 | 91.6 (98.8) | – | 877–1,689 |
| ISR10 | 98.0 (99.2) | 92.2 (99.6) | ||
| VP3 | PER161 | 90.5 (99.1) | – | 1,690–2,412 |
| ISR10 | 96.8 (100) | 90.3 (99.1) | ||
| VP1 | PER161 | 91.8 (97.2) | – | 2,413–3,300 |
| ISR10 | 97.2 (99.6) | 91.6 (96.9) | ||
| 2A | PER161 | 91.7 (100) | – | 3,301–3,747 |
| 2B | PER161 | 89.6 (96.9) | – | 3,748–4,038 |
| 2C | PER161 | 91.2 (97.5) | – | 4,039–5,025 |
| 3A | PER161 | 92.0 (97.7) | – | 5,026–5,289 |
| 3B | PER161 | 89.3 (100) | – | 5,290–5,355 |
| 3C | PER161 | 90.4 (93.4) | – | 5,356–5,904 |
| 3D | PER161 | 90.4 (96.7) | – | 5,905–7,287 |
| 3′UTR | PER161 | 96.6 | – | 7,288–7,346 |
There were no sequences of 5′UTR, 2A–2D, 3A–3D, and 3′UTR for ISR10 strain
aThe position was according the CQ5185 strain (JX678288)