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. 2020 Feb 20;9:e50629. doi: 10.7554/eLife.50629

Figure 7. Testing a possible role of diffusive PBP2 for cross-linking.

Figure 7.

(A) Cartoon of PBP2 finding the target site of a 'rod complex' through free diffusion (left) or filament-facilitated diffusion (right). (B) The average encounter rate between any of 100 freely diffusing PBP2 molecules and a given rod-complex site as a function of the unknown latency time toff (the duration for which a single PBP2 enzyme is inactive after a cross-linking reaction) (red) in comparison to the physiological cross-linking rate (dashed-dotted line) (C) Distribution of the number of successive cross-linking reactions conducted by the same PBP2 molecule at the same rod-complex site for two different latency times. (D–E) Facilitated diffusion along circumferentially oriented filaments centered at every rod-complex site increases the encounter rate (D) and renders diffusion asymmetric (E). (F) Diffusion of PAmCherry-PBP2 along the long axis of the cell (x-direction) is faster than around the circumference (y-direction), suggesting that PBP2 does not undergo facilitated diffusion along circumferentially oriented filaments. Reduced diffusion around the circumference is possibly caused by out-of-plane motion.