Skip to main content
. 2020 Mar 23;21:121. doi: 10.1186/s12859-020-3411-3

Table 1.

The feature selection result on simulation data in which 10 key biomakers are included. Mean reported based on 500 replications

C IC
p/r Ratio n0 n1 ACC ROC HD ACC ROC HD
A: p=100,r=0 1 : 1 480 480 8.43 2.76 9.93 0.10 0.09 0.00
3 : 1 720 240 10.00 2.95 10.00 3.79 0.77 0.04
9 : 1 864 96 10.00 6.28 10.00 19.64 1.33 0.42
15 : 1 900 60 10.00 7.95 10.00 60.36 0.85 1.77
B: p=100,r=0.4|ij| 1 : 1 480 480 9.96 9.86 9.96 0.25 0.13 0.01
3 : 1 720 240 10.00 9.96 9.99 6.67 0.90 0.14
9 : 1 864 96 10.00 9.98 10.00 57.64 3.09 1.14
15 : 1 900 60 3.80 9.91 10.00 31.01 3.23 1.85
C: p=100,r=0.92|ij| 1 : 1 480 480 9.98 10.00 10.00 0.51 0.63 0.57
3 : 1 720 240 10.00 9.84 9.90 1.58 0.59 0.47
9 : 1 864 96 0.69 8.01 8.01 5.87 0.67 0.59
15 : 1 900 60 0.00 6.85 6.85 0.00 0.84 0.71
D: p=2000,r=0 1 : 1 480 480 7.89 2.79 9.94 0.10 0.04 0.00
3 : 1 720 240 10.00 3.20 10.00 5.08 1.54 0.03
9 : 1 864 96 10.00 5.83 10.00 98.24 1.83 0.20
15 : 1 900 60 10.00 7.38 10.00 404.96 5.94 2.13
E: p=2000,r=0.4|ij| 1 : 1 480 480 9.97 9.91 10.00 0.28 0.18 0.01
3 : 1 720 240 10.00 9.91 10.00 13.06 1.06 0.16
9 : 1 864 96 10.00 9.95 10.00 293.50 4.30 0.57
15 : 1 900 60 10.00 9.93 9.98 711.05 6.34 2.71
F: p=2000,r=0.92|ij| 1 : 1 480 480 9.95 10.00 10.00 0.76 0.54 0.53
3 : 1 720 240 10.00 9.73 9.72 4.05 0.28 0.25
9 : 1 864 96 3.15 7.95 7.95 161.82 0.68 0.56
15 : 1 900 60 1.07 6.62 6.62 107.61 0.69 0.58