Table 1.
The sequences of the oligonucleotides used in this study
31-mer thrombin-inhibiting aptamer | 5′ CACTGGTAGGTTGGTGTGGTTGGGGCCAGTG 3′ |
AES 1 | 5′ CACTGGTAGGTTGGTGTGGTGCGAGAAGTTAAGACCTATGCTCGCTGGGGCCAGTG 3′ |
AES 2 | 5′ CACTGGTAGGTTGGTGTGGTTGCGAGAAGTTAAGACCTATGCTCGCTTGGGGCCAGTG 3′ |
15-mer target DNA | 5′ CATAGGTCTTAACTT 3′ |
15-mer control DNA | 5′ ATTGCTATCGTACAT 3′ |
AES SARS 1 | 5′ CACTGGTAGGTTGGTGTGGTTGGACGACGAATTCATGATCACGTCCTTGGGGCCAGTG 3′ |
15-mer SARS DNA | 5′ TGATCATGAATTCGT 3′ |
Stem and loop SARS 1 | 5′TGGACGACGAATTCATGATCACGTCCT 3′ |
AES SARS 2 | 5′ CACTGGTAGGTTGGTGTGGTTCGGACGCACGAATTCATGATCAACATCCCTACGTCCGTTGGGGCCAGTG 3′ |
AES SARS 3 | 5′ CACTGGTAGGTTGGTGTGGTTGCGGACGCACGAATTCATGATCAACATCCCTACGTCCGCTTGGGGCCAGTG 3′ |
AES SARS 4 | 5′ CACTGGTAGGTTGGTGTGGTTCGCGGACGCACGAATTCATGATCAACATCCCTACGTCCGCGTTGGGGCCAGTG 3′ |
25-mer SARS DNA | 5′ TAGGGATGTTGATCATGAATTCGTG 3′ |
The stem-and-loop sequence inserted into the 31-mer thrombin-inhibiting aptamer is underlined. The 15-mer target DNA, the 15-mer SARS, and the 25-mer SARS are complementary strands of the loop sequence of AES 1, 2, and AES SARS 1 and AES SARS 2, 3, and 4, respectively. The stem-and-loop SARS 1 sequence is the oligonucleotide inserted into AES SARS 1.