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The impact of the distance (parameter D) on the number of amino acids within a cluster. Panel 2 peptides were used for Mapitope prediction on the SARS-CoV S crystalline structure. The images are RasTop space-fill representations of the spike protein RBD indicating the three clusters; A (red), B (green) and C (yellow) at different D values (left image, 6 Å; middle, 10 Å; right, 12 Å). All the predictions were conducted at ST=3.
