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During the clique detection the shorter distance of two pseudocenter pairs is used to adjust the value for the acceptance tolerance (ddiff) in a distance-dependent manner
| Shorter distance between the two pseudocenters pairs (Å) | Tolerance distance ddiff (Å) |
|---|---|
| 10.0–12.0 | 2.0 |
| 8.0–10.0 | 1.6 |
| 4.0–8.0 | 1.2 |
| 2.0–4.0 | 0.8 |
| <2.0 | 0.6 |
