Table 1.
Coronaviruses and a torovirus used to constructed phylogenetic tree.
| No. | Accession No. | Abbreviation | Genome | Group | Length (nt) |
|---|---|---|---|---|---|
| 1 | NC_002654 | HCoV-229E | Human coronavirus 229E | I | 27 317 |
| 2 | NC_002306 | TGEV | Transmissible gastroenteritis virus | I | 28 586 |
| 3 | NC_003436 | PEDV | Porcine epidemic diarrhea virus | I | 28 033 |
| 4 | U00735 | BCoVM | Bovine coronavirus strain Mebuus | II | 31 032 |
| 5 | AF391542 | BCoVL | Bovine coronavirus isolate BCoV-LUN | II | 31 028 |
| 6 | AF220295 | BCoVQ | Bovin coronavirus strain Quebec | II | 31 100 |
| 7 | NC_003045 | BCoV | Bovine coronavirus | II | 31 028 |
| 8 | AF208067 | MHVM | Murine hepatitis virus strain ML-10 | II | 31 233 |
| 9 | AF201929 | MHV2 | Murine hepatitis virus stain 2 | II | 31 276 |
| 10 | AF208066 | MHVP | Murine hepatitis virus stain Penn 97-1 | II | 31 112 |
| 11 | NC_001846 | MHV | Murine hepatitis virus | II | 31 357 |
| 12 | NC_001451 | IBV | Avian infectious bronchitis virus | III | 27 608 |
| 13 | AY278488 | BJ01 | SARS coronavirus BJ01 | – | 29 725 |
| 14 | AY278741 | Urbani | SARS coronavirus Urbani | – | 29 727 |
| 15 | AY278491 | HKU-39849 | SARS coronavirus HKU-39849 | – | 29 742 |
| 16 | AY278554 | CUHK-W1 | SARS coronavirus CUHK-W1 | – | 29 736 |
| 17 | AY282752 | CUHK-Su10 | SARS coronavirus CUHK-Su10 | – | 29 736 |
| 18 | AY283794 | SIN2500 | SARS coronavirus SIN2500 | – | 29 711 |
| 19 | AY283795 | SIN2677 | SARS coronavirus SIN2677 | – | 29 705 |
| 20 | AY283796 | SIN2679 | SARS coronavirus SIN2679 | – | 29 711 |
| 21 | AY283797 | SIN2748 | SARS coronavirus SIN2748 | – | 29 706 |
| 22 | AY283798 | SIN2774 | SARS coronavirus SIN2774 | – | 29 711 |
| 23 | AY291451 | TW1 | SARS coronavirus TW1 | – | 29 729 |
| 24 | NC_004718 | TOR2 | SARS coronavirus | – | 29 751 |
| 25 | X52374 | EToV | Equine torovirus | – | 7920 |