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Graphical representation of the hexameric bundles of p7 (GT 1a) using protocol 1(A), protocol 2 (B) and protocol 3 (C) as outlined in the text. The structures are shown at the initial stage of 0 ns of the MD simulation and at the end at 100 ns. Unprotonated His-17 is highlighted in tan. The view is from the side of the termini towards the loop region.
