TABLE 4.
Putative targets of lncRNAs for miRNAs.
| miRNA Acc. | Target Acc. | Expect | UPE | miRNA-aligned fragment | Target-aligned fragment | Inhibition |
| ath-miR156i | MSTRG.56302.5 | 1 | 11.063 | GAGAGAGAGAGAGAGAGCAG | UUUCUCUCUCUCUCUCUCUC | Cleavage |
| csn-miR156h | MSTRG.116911.1 | 1 | 4.055 | UGAGAGAGAGAGAGAGAGCAU | CCCCUCUCUCUCUCUCUCUCA | Cleavage |
| gma-miR1533c | MSTRG.118391.1 | 1 | 10.118 | AAAAUAAAAAUAAUAAUAA | UUAUUUUUAUUUUUAUUUU | Cleavage |
| lja-miR7539 | MSTRG.36615.10 | 1 | 19.202 | GAGAGAGAGAGAGCGAGAGG | CCUCUCUCUCUCUCUCUCUC | Cleavage |
| MSTRG.56302.5 | 1 | 10.734 | GAGAGAGAGAGAGCGAGAGG | UCUCUCUCUCUCUCUCUCUC | Cleavage | |
| MSTRG.55773.2 | 1 | 1.11 | GAGAGAGAGAGAGCGAGAGG | UCUCUCUCUCUCUCUCUCUC | Cleavage | |
| MSTRG.92784.12 | 1 | 6.259 | GAGAGAGAGAGAGCGAGAG | CUCUCUCUCUCUCUCUCUC | Cleavage | |
| ath-miR426 | MSTRG.106114.4 | 1.5 | 5.662 | AUUUGGAAAAGGAAAGAGAAAAG | UUUUUCUUUUUUCUUUUCUAAAU | Cleavage |
| ath-miR5021 | MSTRG.26810.3 | 1.5 | 6.423 | AGAGAAGAAGAAGAAGAAAA | UCUUCUUCUUCUUCUUCUUU | Cleavage |
| ath-miR5998b | MSTRG.143628.1 | 1.5 | 7.673 | UUAGUUUUUGUUUUGUUUUGU | AAAAAACAAAACAAAAACAAA | Cleavage |
| csn-miR156h | MSTRG.92784.12 | 1.5 | 6.259 | UGAGAGAGAGAGAGAGAGCA | CUCUCUCUCUCUCUCUCUCG | Cleavage |
| MSTRG.56302.5 | 1.5 | 6.06 | UGAGAGAGAGAGAGAGAGCAU | UCUCUCUCUCUCUCUCUCUCG | Cleavage | |
| lja-miR7539 | MSTRG.91236.3 | 1.5 | 7.404 | GAGAGAGAGAGAGCGAGAGG | ACUCUCUCUUUCUCUCUCUC | Cleavage |
| ppe-miR6281 | MSTRG.92784.12 | 1.5 | 6.259 | AUGAGAGAGAGAGAGAGUGAG | CUCUCUCUCUCUCUCUCUCGU | Cleavage |
| ath-miR156i | MSTRG.36615.10 | 2 | 17.653 | GAGAGAGAGAGAGAGAGCAG | GCCCUCUCUCUCUCUCUCUC | Cleavage |
| MSTRG.55773.2 | 2 | 1.11 | GAGAGAGAGAGAGAGAGCAG | CAUCUCUCUCUCUCUCUCUC | Cleavage | |
| MSTRG.116911.1 | 2 | 4.044 | GAGAGAGAGAGAGAGAGCAG | CCCCUCUCUCUCUCUCUCUC | Cleavage | |
| ath-miR5021 | MSTRG.88836.3 | 2 | 5.697 | AGAGAAGAAGAAGAAGAAAA | CUAUGUUCUUCUUCUUCUCU | Cleavage |
| csn-miR156h | MSTRG.36615.10 | 2 | 18.775 | UGAGAGAGAGAGAGAGAGCAU | GCCCUCUCUCUCUCUCUCUCU | Cleavage |
| MSTRG.55773.2 | 2 | 1.11 | UGAGAGAGAGAGAGAGAGCAU | CAUCUCUCUCUCUCUCUCUCU | Cleavage | |
| lja-miR7539 | MSTRG.116911.1 | 2 | 4.044 | GAGAGAGAGAGAGCGAGAGG | CCCCUCUCUCUCUCUCUCUC | Cleavage |
| mtr-miR2586a | MSTRG.123314.2 | 2 | 18.404 | AGAGGUGUCCGUGCUUCAU | AUGAAGCAUGGACACAUCU | Cleavage |
| ppe-miR6281 | MSTRG.116911.1 | 2 | 4.06 | AUGAGAGAGAGAGAGAGUGAG | CCCUCUCUCUCUCUCUCUCAC | Cleavage |
| ptc-miR6462a | MSTRG.56302.5 | 2 | 5.5 | UCUCUUUUGCAUUUUUGCUGCC | GAGAGCAAAGAUGAAGAAGAGA | Translation |