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. 2020 Mar 19;11:195. doi: 10.3389/fpls.2020.00195

Table 1.

Molecular S-genotyping in crop species.

Species S-alleles/S-haplotypesa Method S-genes Nb Refs.
Brassicaceae
Cabbage, broccoli 16 (Sa-Sp) PCR-RFLP c SLG 40 Park et al. (2001)
Cabbage, cauliflower 17 (Bo-Bob) PCR-RFLP SLG/SRK 30 Wang et al. (2007)
Cabbage 40 (BrS-) Dot-blot SP11 45 Oikawa et al. (2011)
Cabbage 16 (S) Sequencing SRK/SP11 107 Tian et al. (2013)
(Brassica oleracea)
Turnip 33 (BoS-) Dot-blot SP11 42 Oikawa et al. (2011)
Chinese cabbage, etc. 26 (Bc-Bcp) PCR-RFLP SLG/SRK 38 Wang et al. (2007)
(Brassica rapa)
Mustard 1 (Bj) PCR-RFLP SLG/SRK 4 Wang et al. (2007)
(Brassica juncea)
Oilseed rape (Brassica napus) 4/2 (S-IandS-IISLGa,b)/(S-IISP11a,b) PCR-CAPS SLG/SP11 125 Zhang X. et al. (2008)
Radish 18 (S1-S18) Southern SLG 29 Sakamoto et al. (1998)
(Raphanus sativus) 7/7 (S1-10/S1-10))a PCR-RFLP SLG/SRK 24 Lim et al. (2002)
9/10 (Rs-SRK1–21/-SP111-21)a Sequencing SRK/SP11 10 Okamoto et al. (2004)
15 (RsS1-40))a Sequencing SLG/SRK 63 Wang et al. (2019)
Rosaceae (tribe Amygdaleae)
Apricot
(Prunus armeniaca)
30 (S1-S20, S22-S30, SC) PCR/Sequencing S-RNase/SFB 261 Halázs et al. (2007a); Halázs et al. (2010a); Zhang L. et al. (2008); Wu et al. (2009); Lachkar et al. (2013); Muñoz-Sanz et al. (2017b); Herrera et al. (2018)
Japanese apricot
(Prunus mume)
13 (S1-S11, Sf, S) PCR S-RNase 16 Yamane and Tao (2009)
Japanese plum
(Prunus salicina)
19 (Sa-Ss) PCR SRNase/SFB 149 Beppu et al. (2002); Beppu et al. (2003); Sapir et al. (2004); Zhang et al. (2007); Halázs et al. (2007b); Guerra et al. (2009); Guerra et al. (2012)
European plum
(Prunus domestica)
18 (SA-SS) PCR S-RNase 16 Halázs et al. (2014)
Peach 3 (S1, S2, S2m, S3, S4) PCR S-RNase 195 Hegedüs et al. (2006); Tao et al. (2007); Hanada et al. (2014)
(Prunus persica) PCR-CAPS
Almond
(Prunus dulcis)
34 (S1-S52, Sf)a PCR/Sequencing S-RNase 170 López et al. (2006); Ortega et al. (2006); Kodad et al. (2008); Halazs et al. (2010b); Currò et al. (2015)
Sweet cherry
(Prunus avium)
18 (S1-S24)a PCR-RFLP
PCR/Sequencing
Microarray
S-RNase/SFB ≳700 Wiersma et al. (2001); Wunsch and Hormaza (2004); Vaughan et al. (2006); Schuster (2012); Cachi and Wünsch (2014);
Pasquer et al. (2008)
Sour cherry
(Prunus cerasus)
15 (S1-36, S, S13´, S6m-S36a-b-b2)a PCR S-RNase 21 Lisek et al. (2017)
Rosaceae (tribe Maleae)
Apple
(Malus x domestica)
Crabapple (Malus spp.)
31 (S1-S46)a PCR-CAPS/PCR
Mplex PCR
PCR-RFLP
S-RNase 596 Yamane and Tao (2009); Kim H. T. et al. (2009); Long et al. (2010); Larsen et al. (2016); Sheick et al. (2018)
European pear
(Pyrus communis)
21 (S1-S24; Sm)a PCR/Sequencing S-RNase 201 Sanzol and Robbins (2008); Goldway et al. (2009); Sanzol (2009); Quinet et al. (2014)
Japanese pear
(Pyrus pyrifolia)
39(S1-S52, S4sm, Sk)a PCR-RFLP/PCR
Microarray
S-RNase 101 Yamane and Tao (2009); Gu et al. (2009); Nashima et al. (2015); Nan et al. (2015)
Loquat
(Eriobotrya japonica)
13 (Sa-Sk, S12-S13) PCR S-RNase 150 Gisbert et al. (2009); Carrera et al. (2011); Wang et al. (2017); Zhang et al. (2017)
Rubiaceae
Coffee
(Coffea spp.)
14 species including
C. arabica. 36 (S1-51)a
Sequencing S-RNase 58 Nowak et al. (2011)
Solanaceae
Tomato
(Solanum subsection Lycopersicon)
5 species including S. arcanum, S. hirsutum, etc. 24 (S6-S26, SC)a, (S1-S2), etc.
S. chilense 30 (S1-S30)
Sequencing



Sequencing
S-RNase



S-RNase
21



34
Kondo et al. (2002)



Igic et al. (2007)
Potato
(Solanum subsection
Petota.)
5 species including S. chacoense, S. S. stenotonum, etc. 25 (S2-S3, S11-S16), (Ss1-Ss10), etc. Sequencing S-RNase 14 Dzidzienyo et al. (2016)
a

Numbered non-consecutively.

b

N Number of cultivars or accessions analyzed.

c

Restriction Fragment Length Polymorphisms.