TABLE 1.
Francisella tularensis subspecies, types or subtypes, and strains used in this study for the inclusivity test panela
| Type or subtype by subspecies | Strain designation(s) | Geographic origin | Infected host or source | Yr isolated |
|---|---|---|---|---|
| F. tularensis subsp. tularensis | ||||
| A.I | SCHU S4 | Ohio | Human | 1941 |
| A.I | NE-NPHL-061598 | Nebraska | Human | 1998 |
| A.I | OK-OSU-98041035 | Oklahoma | Cat | 1998 |
| A.I | NC-RADDL-48620-97 | North Carolina | Rabbit | 1997 |
| A.I | AK-APHL_1100558 | Arkansas | Hare | 2004 |
| A.I | MO-MPHL-D05 | Missouri | Human | 2005 |
| A.I | NE-UNVDL-062807 | Nebraska | Squirrel | 2007 |
| A.I | WY-WPHL-06F12348 | Wyoming | Human | 2006 |
| A.I | NE-Child-090712 | Nebraska | Human | 2012 |
| A.I | NE-UNLVDL-070213 | Nebraska | Cat | 2013 |
| A.II | WY96-3418, NR-644b | Wyoming | Human | 1996 |
| A.II | WY-WSVL-00W4114 | Wyoming | Prairie dog | 2000 |
| A.II | UT-UDHL-80402860 | Wyoming | Human | 2004 |
| A.II | WY-WPHL-BT324 | Wyoming | Human | 1996 |
| A.II | ATCC 6223 | Unknown | Unknown | Unknown |
| A.II | WY-WPHL-03W10146 | Wyoming | Human | 2003 |
| A.II | WY-WPHL-05W9954 | Wyoming | Human | 2005 |
| A.II | WY-WPHL-06W9410 | Wyoming | Human | 2006 |
| A.II | UT-UDHL-70102163 | Utah | Human | 2001 |
| A.II | WY-WPHL-07F13554 | Wyoming | Human | 2007 |
| F. tularensis subsp. holarctica | ||||
| B | LVS | Russia | Vole | Unknown |
| B | WY-WSVL-96194280 | Wyoming | Rabbit | 1996 |
| B | WY-WSVL-9868529 | Wyoming | Guinea pig | 1998 |
| B | WY-WSVL-OvineNC | Wyoming | Sheep | Unknown |
| B | FR-LR | France | Human | 1993 |
| B | NE-NPHL-061705 | Nebraska | Human | 2005 |
| B | MO-MPHL-G05 | Missouri | Human | 2005 |
| B | UT-UDH-70001092 | Utah | Human | 2000 |
| B | NE-NPHL-072606 | Nebraska | Human | 2006 |
| B | NE-Methodist-061113 | Nebraska | Human | 2013 |
| F. tularensis subsp. mediasiatica | ||||
| N/A | FSC147b | Kazakhstan | Gerbil | 1965 |
| N/A | FSC148 | Central Asia | Tick | 1982 |
| N/A | FSC149 | Central Asia | Unknown | Unknown |
| F. tularensis subsp. novicida | ||||
| N/A | U112 | Utah | Water | 1951 |
| N/A | NE-NPHL-101315 | Nebraska | Human | 2015 |
a
LVS, live vaccine strain; N/A, not applicable.
b
Reference strains SCHU S4 (F. tularensis subsp. tularensis subtype A.I), WY96-3418 (F. tularensis subsp. tularensis subtype A.II), LVS (F. tularensis subsp. holarctica, also known as type B), FSC147 (F. tularensis subsp. mediasiatica), and U112 (F. tularensis subsp. novicida) were used for the initial screening process.