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. 2020 Mar 26;7:104. doi: 10.1038/s41597-020-0449-z

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© The Author(s) 2020

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Fig. 2 — Characteristics of the murine spectral library. (a) True positive (black) and all protein identifications (red) as a function of protein FDR. The vertical dashed line was protein FDR of 0.01 determined by MAYU software. (b) True positive (black) and all peptide identifications (red) as a function of protein FDR. The vertical dashed line was protein FDR of 0.01 determined by MAYU software. (c) Overlap of murine proteins in UniProtKB/Swiss-Prot, a subset annotated with protein-level evidence and the murine spectral library. (d) Coverage of the proteome for SWATH-MS spectral libraries of different species. The numbers of proteome coverage were directly taken from the cited publication^13,15,17,38. (e) The number of proteotypic peptides per protein in the murine spectral library.