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. 2020 Mar 16;2020:8196147. doi: 10.1155/2020/8196147

Table 2.

The chemical structures of top six scoring ligand molecules against MLAA-42 protein.

S. no. Structure and IUPAC name of molecule Glide energy (KJ/Mol) Binding energy (Kcal/mol) The interacting amino acid residues Bond distance (Å)
1 Inline graphic
−63.59 −12.19 H-bonds
LYS40 : N – L1 2.91
THR98 : N – L1 2.50
ILE100 : N – L1 2.67
LYS40 : O – L1 2.32
ILE96 : O – L1 2.18
THR98 : O – L1 2.15

2 Inline graphic
−50.27 −11.83 H-bonds
TYR38 : N – L2 2.89
ILE100 : N – L2 2.99
TYR38 : O – L2 1.94
π-π interactions
TRP85-L2 4.95

3 Inline graphic
−42.22 −11.61 H-bonds
ILE100 : H – L3 1.68
THR98 : O – L3 2.36
TYR38 : O – L3 2.00

4 Inline graphic
−47.52 −11.30 H-bonds
LYS40 : N – L4 2.95
THR98 : N – L4 2.65
THR98 : O – L4 2.26

5 Inline graphic
−39.53 −11.12 H-bonds
LYS40 : N – L5 2.67
THR98 : O – L5 2.13
ASP99 : OD1-L5 2.79
π-π interactions
TRP85-L5 4.87

6 Inline graphic
−40.65 −11.10 H-bonds
ILE100 : N – L6 2.69
TYR38 : O – L6 2.30
THR98 : OG1-L6 2.29

Table represents top six ligand molecules with binding energies in range of −12.19 to −9.22 Kcal/mol, hydrogen bonds, and pi-interactions to MLAA-42's active site pocket.