Table 3.
Country | Host age | Total number | Molecular marker(s), Cryptosporidium species or genotype (% of positive) | Molecular marker(s), Giardia duodenalis assemblage (% of positive) | References |
---|---|---|---|---|---|
Australia | ≤3 or 3–9 months | 201 | SSU-rRNA and gp60 Cryptosporidium parvum 3% Cryptosporidium bovis 10% Cryptosporidium ryanae 3% |
tpi Assemblage A 1% Assemblage E 24% |
Abeywardena et al. (2013a) |
Belgium | <10 weeks | 333 | – | β-giardin | Geurden et al. (2008a) |
Assemblage A 16% | |||||
Assemblage E 84% | |||||
tpi | |||||
Assemblage A 6% | |||||
Assemblage E 71% | |||||
Mixed A and E 22% | |||||
Canada | <6 months | 739 | SSU-rRNA and hsp70 | SSU-rRNA and β-giardin | Budu-Amoako et al. (2012a) |
>6 months | C. parvum 24% | Assemblage A 4% | |||
C. bovis 20% | Assemblage B 7% | ||||
C. ryanae 7% | Assemblage E 89% | ||||
Cryptosporidium andersoni 49% | |||||
Canada | Pooled manure samples from different ages | 112 | SSU-rRNA and hsp70 | SSU-rRNA and β-giardin | Dixon et al. (2011) |
C. andersoni 100% | Assemblage E 100% | ||||
Japan | 2 months to 15 years | 113 | SSU-rRNA | Murakoshi et al. (2012) | |
C. bovis 13% | |||||
C. ryanae 5% | |||||
Mixed C. bovis and C. ryanae 2% | |||||
USA | Calves (6–8 months) and cows (>2 years) | 212 | SSU-rRNA | – | Feltus et al. (2008) |
C. bovis 9.4% | |||||
C. andersoni 1.4% | |||||
Cryptosporidium deer-like genotype 6.6% | |||||
USA | 6–18 months | 819 | SSU-rRNA | – | Fayer et al. (2010) |
C. andersoni 68% | |||||
C. bovis 23% | |||||
C. ryanae 9% | |||||
USA | 6–18 months | 819 | – | SSU-rRNA | Santin et al. (2012) |
Assemblage E 31.5% | |||||
Assemblage A 1.2% | |||||
Vietnam | 2–6 months | 232 | SSU-rRNA | – | Nguyen et al. (2012) |
C. bovis (0.8%) | |||||
C. ryanae (3.9%) | |||||
Zambia | 2–70 days | 238 | SSU-rRNA | – | Geurden et al. (2006) |
C. parvum 2.9% | |||||
Cryptosporidium suis 0.4% | |||||
hsp70 | |||||
C. parvum 1.3% | |||||
C. suis 0.4% |