TABLE 1.
Simulation | No. proteins | Bilayer composition | No. Lipids | Box size (x and y) | Duration |
Atomistic | |||||
β1 monomer | 1 | POPC | 225 | 9 nm | 25 × 400 ns |
β1 monomer (Ig mutant) | 1 | POPC | 225 | 9 nm | 3 × 400 ns |
β1 monomer (Ig + linker mutant) | 1 | POPC | 225 | 9 nm | 3 × 400 ns |
β1 monomer (linker mutant) | 1 | POPC | 225 | 9 nm | 3 × 400 ns |
β3 monomer | 1 | POPC | 225 | 9 nm | 25 × 400 ns |
β3 trimer | 3 | POPC | 506 | 13 nm | 3 × 400 ns |
Coarse-grained | |||||
β3 | 36 | PM | 10,080 | 52 nm | 3 × 10 μs |