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. 2020 Feb 1;35(1):ME19060. doi: 10.1264/jsme2.ME19060

Table 1.

Diversity and novelty of microorganisms isolated from wastewater treatment samples using different isolation procedures.

Culture
conditions
Number of
isolates
Number of
phylotypesa
Shannon
diversity index
Number of
novel
phylotypesb
Novelty
indexc
Aerobic
 PT 68 34 3.26 5 0.074
 PS 67 40 3.09 13 0.194
Nitrate reduction
 PT 41 19 2.55 5 0.122
 PS 45 24 2.72 10 0.222
Fermentation
 PT 35 6 1.62 1 0.029
 PS 40 13 2.39 4 0.100

a Isolates were assigned to phylotypes based on partial 16S rRNA gene sequences, with a sequence identify cut-off value of 97%.

b Phylotypes with less than 80% classification reliability at the genus level in the RDP Classifier analysis were defined as novel.

c The novelty index was calculated as “the number of novel phylotypes/total number of isolates”.