Table 1.
Sequences of primers used in the present study.
Primer | Sequence | Position in genome# | Direction | Size (bp) |
---|---|---|---|---|
0906-1F | GAAGACATCTTTGGTGTCTCTCC | 901–923 | Fw | 1979 |
0906-1R | GTCATCATCACTCTCATAATCAC | 2858–2880 | ReV | |
0906-2F | GTGATTATGAGAGTGATGATGAC | 2778–2800 | Fw | 2017 |
0906-2R | CAATGGCCACTGTTAGTAGAGCC | 4763–4795 | ReV | |
0906-3F | GATGCAAATAGTGTGGATGAGG | 4643–4664 | Fw | 2153 |
0906-3R | CAGGTTCCACTACTAATTGCTC | 6775–6796 | ReV | |
0906-4F | CACAGAGTGCGCATGCATTAGAG | 6677–6699 | Fw | 2109 |
0906-4R | GAGTAACGTGGTGGTGTATAC | 8766–8786 | ReV | |
0906-5F | CTTGCAGCGTATGCTAGAC | 8641–8659 | Fw | 2229 |
0906-5R | GAGTAACTGACTGTAAAACAG | 10850–10870 | ReV | |
0906-6F | CTTGCATCTGATGATGTTGGAG | 10729–10750 | Fw | 2036 |
0906-6R | CCTTATTATCTTCAAACCAC | 12746–12765 | ReV | |
0906-7F | CTACGCCTTGAGGCATTTTGAC | 12656–12677 | Fw | 2207 |
0906-7R | GCGATATAACGCTCCATAACAG | 14842–14863 | ReV | |
0906-8F | GCTAGTGGAGGTTGATGGTGAGC | 14735–14757 | Fw | 2089 |
0906-8R | CATCACGCTGACGCATGACAAC | 16803–16824 | ReV | |
0906-9F | CTGCGGATTCGCAGCATGCGCTG | 16729–16751 | Fw | 2150 |
0906-9R | CTACATATGAGTACCGCTTATAAC | 18856–18879 | ReV | |
0906-10F | CACAGATATCGAGCCAAATGGCC | 18752–18774 | Fw | 1564 |
0906-10R | CATCTCTTACCAGTAACTTAC | 20296–20316 | ReV | |
S1Oligo3′ | TGAAAACTGAACAAAAGAC | 20248–20266 | Fw | 1719 |
S1Oligo5′ | TTGCCCTTATGTTAGTTATG | 21948–21967 | ReV | |
0906-11F | CAGTTTGTAGTGTCTGGTGGC | 21802–21822 | Fw | 2147 |
0906-11R | GTCTAGACTGTAAGTTACTATT | 23928–23949 | ReV | |
0906-12F | GTAACTGAACAATACAGACC | 23767–23786 | Fw | 2266 |
0906-12R | CTTAGGCTGGGGTGAATTAAG | 26002–26033 | ReV |
Based on the H120 strain genome (FJ888351).